Protein–RNA interactions for Protein: Q8K440

Abca8b, ATP-binding cassette sub-family A member 8-B, mousemouse

Predictions only

Length 1,620 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca8bQ8K440 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC28.65■■■□□ 2.18
Abca8bQ8K440 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Abca8bQ8K440 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Abca8bQ8K440 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Abca8bQ8K440 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC28.64■■■□□ 2.18
Abca8bQ8K440 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC28.64■■■□□ 2.18
Abca8bQ8K440 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Abca8bQ8K440 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC28.64■■■□□ 2.18
Abca8bQ8K440 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Abca8bQ8K440 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC28.63■■■□□ 2.17
Abca8bQ8K440 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Abca8bQ8K440 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Abca8bQ8K440 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC28.63■■■□□ 2.17
Abca8bQ8K440 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Abca8bQ8K440 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
Abca8bQ8K440 Alkbh1-212ENSMUST00000185301 408 ntBASIC28.62■■■□□ 2.17
Abca8bQ8K440 Wnt10b-205ENSMUST00000226846 1204 ntBASIC28.62■■■□□ 2.17
Abca8bQ8K440 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Abca8bQ8K440 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Abca8bQ8K440 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Abca8bQ8K440 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
Abca8bQ8K440 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC28.61■■■□□ 2.17
Abca8bQ8K440 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC28.61■■■□□ 2.17
Abca8bQ8K440 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC28.61■■■□□ 2.17
Abca8bQ8K440 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Abca8bQ8K440 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Abca8bQ8K440 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Abca8bQ8K440 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Abca8bQ8K440 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Abca8bQ8K440 Gm32051-202ENSMUST00000197905 2385 ntBASIC28.61■■■□□ 2.17
Abca8bQ8K440 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC28.61■■■□□ 2.17
Abca8bQ8K440 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Abca8bQ8K440 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Abca8bQ8K440 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC28.61■■■□□ 2.17
Abca8bQ8K440 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC28.61■■■□□ 2.17
Abca8bQ8K440 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC28.61■■■□□ 2.17
Abca8bQ8K440 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Abca8bQ8K440 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC28.6■■■□□ 2.17
Abca8bQ8K440 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Abca8bQ8K440 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC28.6■■■□□ 2.17
Abca8bQ8K440 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC28.6■■■□□ 2.17
Abca8bQ8K440 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Abca8bQ8K440 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Abca8bQ8K440 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Abca8bQ8K440 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Abca8bQ8K440 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Abca8bQ8K440 Gm6433-201ENSMUST00000118634 875 ntBASIC28.59■■■□□ 2.17
Abca8bQ8K440 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC28.59■■■□□ 2.17
Abca8bQ8K440 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Abca8bQ8K440 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
Abca8bQ8K440 Gm32699-201ENSMUST00000221728 1988 ntBASIC28.59■■■□□ 2.17
Abca8bQ8K440 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Abca8bQ8K440 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Abca8bQ8K440 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Abca8bQ8K440 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Abca8bQ8K440 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Abca8bQ8K440 Gm8668-201ENSMUST00000120559 1447 ntBASIC28.58■■■□□ 2.17
Abca8bQ8K440 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Abca8bQ8K440 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC28.58■■■□□ 2.17
Abca8bQ8K440 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC28.58■■■□□ 2.17
Abca8bQ8K440 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Abca8bQ8K440 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
Abca8bQ8K440 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC28.57■■■□□ 2.16
Abca8bQ8K440 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC28.57■■■□□ 2.16
Abca8bQ8K440 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Abca8bQ8K440 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC28.56■■■□□ 2.16
Abca8bQ8K440 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Abca8bQ8K440 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Abca8bQ8K440 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Abca8bQ8K440 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Abca8bQ8K440 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Abca8bQ8K440 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Abca8bQ8K440 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Abca8bQ8K440 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC28.55■■■□□ 2.16
Abca8bQ8K440 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC28.55■■■□□ 2.16
Abca8bQ8K440 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC28.54■■■□□ 2.16
Abca8bQ8K440 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC28.54■■■□□ 2.16
Abca8bQ8K440 Gm19094-201ENSMUST00000209791 1246 ntBASIC28.54■■■□□ 2.16
Abca8bQ8K440 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Abca8bQ8K440 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Abca8bQ8K440 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Abca8bQ8K440 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC28.54■■■□□ 2.16
Abca8bQ8K440 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
Abca8bQ8K440 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Abca8bQ8K440 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Abca8bQ8K440 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Abca8bQ8K440 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC28.54■■■□□ 2.16
Abca8bQ8K440 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC28.54■■■□□ 2.16
Abca8bQ8K440 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC28.54■■■□□ 2.16
Abca8bQ8K440 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Abca8bQ8K440 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Abca8bQ8K440 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC28.53■■■□□ 2.16
Abca8bQ8K440 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC28.53■■■□□ 2.16
Abca8bQ8K440 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Abca8bQ8K440 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Abca8bQ8K440 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Abca8bQ8K440 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC28.52■■■□□ 2.16
Abca8bQ8K440 Gm5417-201ENSMUST00000079706 384 ntBASIC28.52■■■□□ 2.16
Abca8bQ8K440 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
Abca8bQ8K440 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms