Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ShfQ8CG80 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.97■□□□□ 0.31
ShfQ8CG80 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ShfQ8CG80 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
ShfQ8CG80 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ShfQ8CG80 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ShfQ8CG80 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ShfQ8CG80 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ShfQ8CG80 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ShfQ8CG80 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ShfQ8CG80 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
ShfQ8CG80 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
ShfQ8CG80 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
ShfQ8CG80 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ShfQ8CG80 Gm7160-202ENSMUST00000188519 1027 ntBASIC16.97■□□□□ 0.31
ShfQ8CG80 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC16.97■□□□□ 0.31
ShfQ8CG80 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.97■□□□□ 0.31
ShfQ8CG80 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ShfQ8CG80 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ShfQ8CG80 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ShfQ8CG80 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
ShfQ8CG80 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ShfQ8CG80 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
ShfQ8CG80 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ShfQ8CG80 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ShfQ8CG80 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ShfQ8CG80 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ShfQ8CG80 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ShfQ8CG80 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ShfQ8CG80 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ShfQ8CG80 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ShfQ8CG80 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC16.96■□□□□ 0.31
ShfQ8CG80 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ShfQ8CG80 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ShfQ8CG80 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
ShfQ8CG80 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ShfQ8CG80 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ShfQ8CG80 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ShfQ8CG80 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ShfQ8CG80 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ShfQ8CG80 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.95■□□□□ 0.3
ShfQ8CG80 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.95■□□□□ 0.3
ShfQ8CG80 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ShfQ8CG80 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ShfQ8CG80 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ShfQ8CG80 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ShfQ8CG80 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ShfQ8CG80 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ShfQ8CG80 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ShfQ8CG80 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ShfQ8CG80 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ShfQ8CG80 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.95■□□□□ 0.3
ShfQ8CG80 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
ShfQ8CG80 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ShfQ8CG80 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
ShfQ8CG80 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ShfQ8CG80 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
ShfQ8CG80 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ShfQ8CG80 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ShfQ8CG80 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ShfQ8CG80 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.94■□□□□ 0.3
ShfQ8CG80 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.94■□□□□ 0.3
ShfQ8CG80 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ShfQ8CG80 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ShfQ8CG80 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ShfQ8CG80 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC16.94■□□□□ 0.3
ShfQ8CG80 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ShfQ8CG80 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC16.94■□□□□ 0.3
ShfQ8CG80 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ShfQ8CG80 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.94■□□□□ 0.3
ShfQ8CG80 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC16.94■□□□□ 0.3
ShfQ8CG80 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
ShfQ8CG80 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ShfQ8CG80 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ShfQ8CG80 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ShfQ8CG80 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ShfQ8CG80 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ShfQ8CG80 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ShfQ8CG80 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ShfQ8CG80 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ShfQ8CG80 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ShfQ8CG80 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC16.93■□□□□ 0.3
ShfQ8CG80 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
ShfQ8CG80 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ShfQ8CG80 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ShfQ8CG80 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ShfQ8CG80 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ShfQ8CG80 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ShfQ8CG80 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC16.92■□□□□ 0.3
ShfQ8CG80 Gm9847-201ENSMUST00000052528 599 ntBASIC16.92■□□□□ 0.3
ShfQ8CG80 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.92■□□□□ 0.3
ShfQ8CG80 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ShfQ8CG80 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ShfQ8CG80 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
ShfQ8CG80 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ShfQ8CG80 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ShfQ8CG80 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ShfQ8CG80 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ShfQ8CG80 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ShfQ8CG80 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms