Protein–RNA interactions for Protein: Q8CEF8

Rnf222, RING finger protein 222, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf222Q8CEF8 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf222Q8CEF8 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf222Q8CEF8 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf222Q8CEF8 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Rnf222Q8CEF8 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.67■□□□□ 0.58
Rnf222Q8CEF8 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf222Q8CEF8 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf222Q8CEF8 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Rnf222Q8CEF8 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Rnf222Q8CEF8 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf222Q8CEF8 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
Rnf222Q8CEF8 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf222Q8CEF8 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf222Q8CEF8 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf222Q8CEF8 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf222Q8CEF8 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf222Q8CEF8 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf222Q8CEF8 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf222Q8CEF8 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf222Q8CEF8 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf222Q8CEF8 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf222Q8CEF8 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.65■□□□□ 0.58
Rnf222Q8CEF8 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf222Q8CEF8 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf222Q8CEF8 Gm6211-202ENSMUST00000167849 925 ntBASIC18.65■□□□□ 0.58
Rnf222Q8CEF8 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf222Q8CEF8 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.65■□□□□ 0.58
Rnf222Q8CEF8 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Rnf222Q8CEF8 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.65■□□□□ 0.58
Rnf222Q8CEF8 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf222Q8CEF8 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf222Q8CEF8 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf222Q8CEF8 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf222Q8CEF8 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf222Q8CEF8 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf222Q8CEF8 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf222Q8CEF8 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf222Q8CEF8 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf222Q8CEF8 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf222Q8CEF8 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf222Q8CEF8 Gm13148-201ENSMUST00000118892 745 ntBASIC18.64■□□□□ 0.57
Rnf222Q8CEF8 Gm12441-201ENSMUST00000121806 588 ntBASIC18.64■□□□□ 0.57
Rnf222Q8CEF8 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Rnf222Q8CEF8 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.64■□□□□ 0.57
Rnf222Q8CEF8 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf222Q8CEF8 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf222Q8CEF8 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf222Q8CEF8 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf222Q8CEF8 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf222Q8CEF8 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf222Q8CEF8 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf222Q8CEF8 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf222Q8CEF8 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf222Q8CEF8 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.63■□□□□ 0.57
Rnf222Q8CEF8 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf222Q8CEF8 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf222Q8CEF8 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.63■□□□□ 0.57
Rnf222Q8CEF8 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf222Q8CEF8 Gm4968-201ENSMUST00000071458 858 ntBASIC18.63■□□□□ 0.57
Rnf222Q8CEF8 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf222Q8CEF8 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf222Q8CEF8 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf222Q8CEF8 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.63■□□□□ 0.57
Rnf222Q8CEF8 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf222Q8CEF8 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf222Q8CEF8 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf222Q8CEF8 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf222Q8CEF8 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf222Q8CEF8 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Rnf222Q8CEF8 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf222Q8CEF8 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Rnf222Q8CEF8 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.62■□□□□ 0.57
Rnf222Q8CEF8 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf222Q8CEF8 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf222Q8CEF8 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf222Q8CEF8 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf222Q8CEF8 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf222Q8CEF8 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf222Q8CEF8 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Rnf222Q8CEF8 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.61■□□□□ 0.57
Rnf222Q8CEF8 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Rnf222Q8CEF8 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.61■□□□□ 0.57
Rnf222Q8CEF8 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf222Q8CEF8 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf222Q8CEF8 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf222Q8CEF8 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf222Q8CEF8 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Rnf222Q8CEF8 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf222Q8CEF8 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf222Q8CEF8 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf222Q8CEF8 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Rnf222Q8CEF8 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
Rnf222Q8CEF8 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf222Q8CEF8 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf222Q8CEF8 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf222Q8CEF8 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Rnf222Q8CEF8 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf222Q8CEF8 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.59■□□□□ 0.57
Rnf222Q8CEF8 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Rnf222Q8CEF8 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms