Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Fam228aQ8CDW1 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Fam228aQ8CDW1 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Fam228aQ8CDW1 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Fam228aQ8CDW1 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.98■□□□□ 0.79
Fam228aQ8CDW1 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Fam228aQ8CDW1 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
Fam228aQ8CDW1 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Fam228aQ8CDW1 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Fam228aQ8CDW1 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Fam228aQ8CDW1 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
Fam228aQ8CDW1 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Fam228aQ8CDW1 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Fam228aQ8CDW1 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Fam228aQ8CDW1 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Fam228aQ8CDW1 Gm22238-201ENSMUST00000175222 88 ntBASIC19.97■□□□□ 0.79
Fam228aQ8CDW1 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Fam228aQ8CDW1 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Fam228aQ8CDW1 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Fam228aQ8CDW1 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.97■□□□□ 0.79
Fam228aQ8CDW1 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Fam228aQ8CDW1 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Fam228aQ8CDW1 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Fam228aQ8CDW1 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Fam228aQ8CDW1 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Fam228aQ8CDW1 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Fam228aQ8CDW1 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Fam228aQ8CDW1 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.96■□□□□ 0.79
Fam228aQ8CDW1 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Fam228aQ8CDW1 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Fam228aQ8CDW1 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Fam228aQ8CDW1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Fam228aQ8CDW1 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Fam228aQ8CDW1 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Fam228aQ8CDW1 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.95■□□□□ 0.78
Fam228aQ8CDW1 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.95■□□□□ 0.78
Fam228aQ8CDW1 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Fam228aQ8CDW1 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.95■□□□□ 0.78
Fam228aQ8CDW1 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.95■□□□□ 0.78
Fam228aQ8CDW1 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.95■□□□□ 0.78
Fam228aQ8CDW1 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Fam228aQ8CDW1 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Fam228aQ8CDW1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Fam228aQ8CDW1 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Fam228aQ8CDW1 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Fam228aQ8CDW1 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Fam228aQ8CDW1 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Fam228aQ8CDW1 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.94■□□□□ 0.78
Fam228aQ8CDW1 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Fam228aQ8CDW1 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Fam228aQ8CDW1 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Fam228aQ8CDW1 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
Fam228aQ8CDW1 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Fam228aQ8CDW1 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Fam228aQ8CDW1 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Fam228aQ8CDW1 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Fam228aQ8CDW1 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Fam228aQ8CDW1 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Fam228aQ8CDW1 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Fam228aQ8CDW1 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.93■□□□□ 0.78
Fam228aQ8CDW1 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Fam228aQ8CDW1 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Fam228aQ8CDW1 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Fam228aQ8CDW1 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Fam228aQ8CDW1 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Fam228aQ8CDW1 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Fam228aQ8CDW1 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Fam228aQ8CDW1 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Fam228aQ8CDW1 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.92■□□□□ 0.78
Fam228aQ8CDW1 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Fam228aQ8CDW1 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Fam228aQ8CDW1 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
Fam228aQ8CDW1 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Fam228aQ8CDW1 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Fam228aQ8CDW1 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Fam228aQ8CDW1 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Fam228aQ8CDW1 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Fam228aQ8CDW1 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.91■□□□□ 0.78
Fam228aQ8CDW1 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Fam228aQ8CDW1 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Fam228aQ8CDW1 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Fam228aQ8CDW1 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Fam228aQ8CDW1 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Fam228aQ8CDW1 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Fam228aQ8CDW1 Serp2-204ENSMUST00000228055 705 ntBASIC19.91■□□□□ 0.78
Fam228aQ8CDW1 Gm5812-201ENSMUST00000061073 957 ntBASIC19.91■□□□□ 0.78
Fam228aQ8CDW1 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Fam228aQ8CDW1 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Fam228aQ8CDW1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Fam228aQ8CDW1 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Fam228aQ8CDW1 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Fam228aQ8CDW1 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Fam228aQ8CDW1 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Fam228aQ8CDW1 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Fam228aQ8CDW1 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Fam228aQ8CDW1 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Fam228aQ8CDW1 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.9■□□□□ 0.78
Fam228aQ8CDW1 Gm15546-201ENSMUST00000122095 826 ntBASIC19.9■□□□□ 0.78
Fam228aQ8CDW1 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.9■□□□□ 0.78
Fam228aQ8CDW1 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms