Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.44■□□□□ 0.86
Vcpip1Q8CDG3 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vcpip1Q8CDG3 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vcpip1Q8CDG3 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vcpip1Q8CDG3 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vcpip1Q8CDG3 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vcpip1Q8CDG3 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vcpip1Q8CDG3 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vcpip1Q8CDG3 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Vcpip1Q8CDG3 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.43■□□□□ 0.86
Vcpip1Q8CDG3 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vcpip1Q8CDG3 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vcpip1Q8CDG3 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.43■□□□□ 0.86
Vcpip1Q8CDG3 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vcpip1Q8CDG3 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Vcpip1Q8CDG3 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vcpip1Q8CDG3 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vcpip1Q8CDG3 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vcpip1Q8CDG3 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Vcpip1Q8CDG3 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Vcpip1Q8CDG3 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Vcpip1Q8CDG3 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Vcpip1Q8CDG3 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vcpip1Q8CDG3 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Vcpip1Q8CDG3 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vcpip1Q8CDG3 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vcpip1Q8CDG3 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vcpip1Q8CDG3 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Vcpip1Q8CDG3 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Vcpip1Q8CDG3 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vcpip1Q8CDG3 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vcpip1Q8CDG3 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vcpip1Q8CDG3 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vcpip1Q8CDG3 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Vcpip1Q8CDG3 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vcpip1Q8CDG3 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Vcpip1Q8CDG3 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vcpip1Q8CDG3 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Vcpip1Q8CDG3 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vcpip1Q8CDG3 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Vcpip1Q8CDG3 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Vcpip1Q8CDG3 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vcpip1Q8CDG3 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vcpip1Q8CDG3 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vcpip1Q8CDG3 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.41■□□□□ 0.86
Vcpip1Q8CDG3 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.4■□□□□ 0.86
Vcpip1Q8CDG3 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vcpip1Q8CDG3 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Vcpip1Q8CDG3 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vcpip1Q8CDG3 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Vcpip1Q8CDG3 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vcpip1Q8CDG3 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vcpip1Q8CDG3 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Vcpip1Q8CDG3 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Vcpip1Q8CDG3 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.4■□□□□ 0.86
Vcpip1Q8CDG3 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.4■□□□□ 0.86
Vcpip1Q8CDG3 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Vcpip1Q8CDG3 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vcpip1Q8CDG3 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Vcpip1Q8CDG3 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vcpip1Q8CDG3 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vcpip1Q8CDG3 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vcpip1Q8CDG3 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Vcpip1Q8CDG3 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vcpip1Q8CDG3 Gm12251-201ENSMUST00000117893 792 ntBASIC20.39■□□□□ 0.85
Vcpip1Q8CDG3 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vcpip1Q8CDG3 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vcpip1Q8CDG3 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vcpip1Q8CDG3 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vcpip1Q8CDG3 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vcpip1Q8CDG3 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vcpip1Q8CDG3 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vcpip1Q8CDG3 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vcpip1Q8CDG3 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vcpip1Q8CDG3 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vcpip1Q8CDG3 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Vcpip1Q8CDG3 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.38■□□□□ 0.85
Vcpip1Q8CDG3 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Vcpip1Q8CDG3 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vcpip1Q8CDG3 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vcpip1Q8CDG3 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Vcpip1Q8CDG3 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
Vcpip1Q8CDG3 Gm18284-201ENSMUST00000172604 624 ntBASIC20.38■□□□□ 0.85
Vcpip1Q8CDG3 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Vcpip1Q8CDG3 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vcpip1Q8CDG3 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vcpip1Q8CDG3 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vcpip1Q8CDG3 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
Vcpip1Q8CDG3 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vcpip1Q8CDG3 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Vcpip1Q8CDG3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vcpip1Q8CDG3 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vcpip1Q8CDG3 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vcpip1Q8CDG3 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vcpip1Q8CDG3 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Vcpip1Q8CDG3 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vcpip1Q8CDG3 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vcpip1Q8CDG3 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Vcpip1Q8CDG3 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.36■□□□□ 0.85
Vcpip1Q8CDG3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms