Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.08■□□□□ 0.81
Uba3Q8C878 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Uba3Q8C878 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Uba3Q8C878 Gm42778-201ENSMUST00000199644 553 ntBASIC20.08■□□□□ 0.81
Uba3Q8C878 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Uba3Q8C878 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Uba3Q8C878 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Uba3Q8C878 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Uba3Q8C878 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Uba3Q8C878 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.07■□□□□ 0.8
Uba3Q8C878 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Uba3Q8C878 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Uba3Q8C878 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Uba3Q8C878 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Uba3Q8C878 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Uba3Q8C878 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Uba3Q8C878 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Uba3Q8C878 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Uba3Q8C878 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Uba3Q8C878 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Uba3Q8C878 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Uba3Q8C878 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Uba3Q8C878 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Uba3Q8C878 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Uba3Q8C878 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.06■□□□□ 0.8
Uba3Q8C878 Gm42642-201ENSMUST00000200683 355 ntBASIC20.06■□□□□ 0.8
Uba3Q8C878 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Uba3Q8C878 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Uba3Q8C878 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Uba3Q8C878 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Uba3Q8C878 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Uba3Q8C878 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Uba3Q8C878 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Uba3Q8C878 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Uba3Q8C878 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Uba3Q8C878 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
Uba3Q8C878 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.05■□□□□ 0.8
Uba3Q8C878 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Uba3Q8C878 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.05■□□□□ 0.8
Uba3Q8C878 Gm8495-201ENSMUST00000188740 694 ntBASIC20.05■□□□□ 0.8
Uba3Q8C878 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.05■□□□□ 0.8
Uba3Q8C878 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Uba3Q8C878 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Uba3Q8C878 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.05■□□□□ 0.8
Uba3Q8C878 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Uba3Q8C878 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Uba3Q8C878 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Uba3Q8C878 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.04■□□□□ 0.8
Uba3Q8C878 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Uba3Q8C878 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Uba3Q8C878 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Uba3Q8C878 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Uba3Q8C878 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.04■□□□□ 0.8
Uba3Q8C878 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.04■□□□□ 0.8
Uba3Q8C878 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Uba3Q8C878 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Uba3Q8C878 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Uba3Q8C878 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Uba3Q8C878 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Uba3Q8C878 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Uba3Q8C878 Gm13234-201ENSMUST00000120010 747 ntBASIC20.03■□□□□ 0.8
Uba3Q8C878 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Uba3Q8C878 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Uba3Q8C878 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.03■□□□□ 0.8
Uba3Q8C878 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Uba3Q8C878 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Uba3Q8C878 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Uba3Q8C878 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Uba3Q8C878 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.02■□□□□ 0.8
Uba3Q8C878 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Uba3Q8C878 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Uba3Q8C878 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Uba3Q8C878 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Uba3Q8C878 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Uba3Q8C878 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Uba3Q8C878 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Uba3Q8C878 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Uba3Q8C878 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.01■□□□□ 0.79
Uba3Q8C878 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Uba3Q8C878 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Uba3Q8C878 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Uba3Q8C878 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.01■□□□□ 0.79
Uba3Q8C878 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.01■□□□□ 0.79
Uba3Q8C878 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Uba3Q8C878 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Uba3Q8C878 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.01■□□□□ 0.79
Uba3Q8C878 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Uba3Q8C878 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Uba3Q8C878 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20■□□□□ 0.79
Uba3Q8C878 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Uba3Q8C878 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20■□□□□ 0.79
Uba3Q8C878 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Uba3Q8C878 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Uba3Q8C878 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Uba3Q8C878 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20■□□□□ 0.79
Uba3Q8C878 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Uba3Q8C878 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Uba3Q8C878 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Uba3Q8C878 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Uba3Q8C878 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms