Protein–RNA interactions for Protein: Q8C3R1

Brat1, BRCA1-associated ATM activator 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brat1Q8C3R1 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Brat1Q8C3R1 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
Brat1Q8C3R1 Gm13534-201ENSMUST00000121169 513 ntBASIC20.08■□□□□ 0.81
Brat1Q8C3R1 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Brat1Q8C3R1 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.08■□□□□ 0.81
Brat1Q8C3R1 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Brat1Q8C3R1 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Brat1Q8C3R1 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Brat1Q8C3R1 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Brat1Q8C3R1 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Brat1Q8C3R1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Brat1Q8C3R1 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Brat1Q8C3R1 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Brat1Q8C3R1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Brat1Q8C3R1 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Brat1Q8C3R1 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.07■□□□□ 0.8
Brat1Q8C3R1 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.07■□□□□ 0.8
Brat1Q8C3R1 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Brat1Q8C3R1 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Brat1Q8C3R1 Golph3-202ENSMUST00000226517 2359 ntBASIC20.07■□□□□ 0.8
Brat1Q8C3R1 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Brat1Q8C3R1 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Brat1Q8C3R1 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Brat1Q8C3R1 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Brat1Q8C3R1 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Brat1Q8C3R1 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.06■□□□□ 0.8
Brat1Q8C3R1 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Brat1Q8C3R1 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Brat1Q8C3R1 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Brat1Q8C3R1 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Brat1Q8C3R1 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Brat1Q8C3R1 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Brat1Q8C3R1 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Brat1Q8C3R1 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Brat1Q8C3R1 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Brat1Q8C3R1 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Brat1Q8C3R1 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Brat1Q8C3R1 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Brat1Q8C3R1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Brat1Q8C3R1 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Brat1Q8C3R1 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.05■□□□□ 0.8
Brat1Q8C3R1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Brat1Q8C3R1 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Brat1Q8C3R1 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Brat1Q8C3R1 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Brat1Q8C3R1 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Brat1Q8C3R1 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.04■□□□□ 0.8
Brat1Q8C3R1 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.04■□□□□ 0.8
Brat1Q8C3R1 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Brat1Q8C3R1 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Brat1Q8C3R1 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Brat1Q8C3R1 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Brat1Q8C3R1 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Brat1Q8C3R1 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.03■□□□□ 0.8
Brat1Q8C3R1 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Brat1Q8C3R1 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Brat1Q8C3R1 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Brat1Q8C3R1 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Brat1Q8C3R1 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Brat1Q8C3R1 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Brat1Q8C3R1 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.03■□□□□ 0.8
Brat1Q8C3R1 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.03■□□□□ 0.8
Brat1Q8C3R1 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.03■□□□□ 0.8
Brat1Q8C3R1 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Brat1Q8C3R1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Brat1Q8C3R1 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Brat1Q8C3R1 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Brat1Q8C3R1 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Brat1Q8C3R1 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Brat1Q8C3R1 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Brat1Q8C3R1 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Brat1Q8C3R1 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Brat1Q8C3R1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Brat1Q8C3R1 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Brat1Q8C3R1 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Brat1Q8C3R1 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Brat1Q8C3R1 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Brat1Q8C3R1 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Brat1Q8C3R1 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.02■□□□□ 0.79
Brat1Q8C3R1 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Brat1Q8C3R1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Brat1Q8C3R1 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Brat1Q8C3R1 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Brat1Q8C3R1 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Brat1Q8C3R1 Gm37179-201ENSMUST00000194862 823 ntBASIC20.01■□□□□ 0.79
Brat1Q8C3R1 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
Brat1Q8C3R1 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Brat1Q8C3R1 Gm10655-201ENSMUST00000098658 1397 ntBASIC20■□□□□ 0.79
Brat1Q8C3R1 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20■□□□□ 0.79
Brat1Q8C3R1 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Brat1Q8C3R1 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20■□□□□ 0.79
Brat1Q8C3R1 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20■□□□□ 0.79
Brat1Q8C3R1 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Brat1Q8C3R1 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Brat1Q8C3R1 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Brat1Q8C3R1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Brat1Q8C3R1 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Brat1Q8C3R1 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.99■□□□□ 0.79
Brat1Q8C3R1 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.99■□□□□ 0.79
Brat1Q8C3R1 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 205.7 ms