Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rft1Q8C3B8 Gm27454-201ENSMUST00000185090 204 ntBASIC16.92■□□□□ 0.3
Rft1Q8C3B8 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rft1Q8C3B8 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rft1Q8C3B8 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rft1Q8C3B8 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rft1Q8C3B8 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rft1Q8C3B8 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rft1Q8C3B8 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Rft1Q8C3B8 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rft1Q8C3B8 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rft1Q8C3B8 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rft1Q8C3B8 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rft1Q8C3B8 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rft1Q8C3B8 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rft1Q8C3B8 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rft1Q8C3B8 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rft1Q8C3B8 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rft1Q8C3B8 Gm15039-201ENSMUST00000118914 875 ntBASIC16.91■□□□□ 0.3
Rft1Q8C3B8 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rft1Q8C3B8 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.91■□□□□ 0.3
Rft1Q8C3B8 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.91■□□□□ 0.3
Rft1Q8C3B8 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.91■□□□□ 0.3
Rft1Q8C3B8 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rft1Q8C3B8 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Rft1Q8C3B8 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Rft1Q8C3B8 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Rft1Q8C3B8 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Rft1Q8C3B8 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rft1Q8C3B8 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rft1Q8C3B8 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rft1Q8C3B8 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rft1Q8C3B8 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Rft1Q8C3B8 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rft1Q8C3B8 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Rft1Q8C3B8 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.9■□□□□ 0.3
Rft1Q8C3B8 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rft1Q8C3B8 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rft1Q8C3B8 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rft1Q8C3B8 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Rft1Q8C3B8 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
Rft1Q8C3B8 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rft1Q8C3B8 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rft1Q8C3B8 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rft1Q8C3B8 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rft1Q8C3B8 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rft1Q8C3B8 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rft1Q8C3B8 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.89■□□□□ 0.29
Rft1Q8C3B8 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Rft1Q8C3B8 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rft1Q8C3B8 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
Rft1Q8C3B8 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rft1Q8C3B8 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rft1Q8C3B8 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rft1Q8C3B8 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.88■□□□□ 0.29
Rft1Q8C3B8 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rft1Q8C3B8 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rft1Q8C3B8 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC16.87■□□□□ 0.29
Rft1Q8C3B8 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rft1Q8C3B8 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rft1Q8C3B8 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rft1Q8C3B8 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rft1Q8C3B8 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rft1Q8C3B8 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rft1Q8C3B8 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Rft1Q8C3B8 Gm45417-201ENSMUST00000209533 758 ntBASIC16.87■□□□□ 0.29
Rft1Q8C3B8 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rft1Q8C3B8 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
Rft1Q8C3B8 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rft1Q8C3B8 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rft1Q8C3B8 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rft1Q8C3B8 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rft1Q8C3B8 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rft1Q8C3B8 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rft1Q8C3B8 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Rft1Q8C3B8 Gm43137-201ENSMUST00000198052 594 ntBASIC16.86■□□□□ 0.29
Rft1Q8C3B8 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rft1Q8C3B8 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Rft1Q8C3B8 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rft1Q8C3B8 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rft1Q8C3B8 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Rft1Q8C3B8 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.86■□□□□ 0.29
Rft1Q8C3B8 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rft1Q8C3B8 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rft1Q8C3B8 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rft1Q8C3B8 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rft1Q8C3B8 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rft1Q8C3B8 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.85■□□□□ 0.29
Rft1Q8C3B8 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.85■□□□□ 0.29
Rft1Q8C3B8 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rft1Q8C3B8 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.85■□□□□ 0.29
Rft1Q8C3B8 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC16.85■□□□□ 0.29
Rft1Q8C3B8 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.85■□□□□ 0.29
Rft1Q8C3B8 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rft1Q8C3B8 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rft1Q8C3B8 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rft1Q8C3B8 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rft1Q8C3B8 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rft1Q8C3B8 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Rft1Q8C3B8 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms