Protein–RNA interactions for Protein: Q8C0Y0

Ppp4r4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, mousemouse

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r4Q8C0Y0 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ppp4r4Q8C0Y0 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ppp4r4Q8C0Y0 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ppp4r4Q8C0Y0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ppp4r4Q8C0Y0 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.2■□□□□ 0.66
Ppp4r4Q8C0Y0 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
Ppp4r4Q8C0Y0 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.2■□□□□ 0.66
Ppp4r4Q8C0Y0 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ppp4r4Q8C0Y0 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ppp4r4Q8C0Y0 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ppp4r4Q8C0Y0 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ppp4r4Q8C0Y0 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ppp4r4Q8C0Y0 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ppp4r4Q8C0Y0 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ppp4r4Q8C0Y0 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ppp4r4Q8C0Y0 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ppp4r4Q8C0Y0 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ppp4r4Q8C0Y0 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ppp4r4Q8C0Y0 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ppp4r4Q8C0Y0 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ppp4r4Q8C0Y0 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ppp4r4Q8C0Y0 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ppp4r4Q8C0Y0 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ppp4r4Q8C0Y0 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.19■□□□□ 0.66
Ppp4r4Q8C0Y0 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ppp4r4Q8C0Y0 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ppp4r4Q8C0Y0 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ppp4r4Q8C0Y0 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ppp4r4Q8C0Y0 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Ppp4r4Q8C0Y0 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ppp4r4Q8C0Y0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ppp4r4Q8C0Y0 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
Ppp4r4Q8C0Y0 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Ppp4r4Q8C0Y0 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ppp4r4Q8C0Y0 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ppp4r4Q8C0Y0 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Ppp4r4Q8C0Y0 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.18■□□□□ 0.66
Ppp4r4Q8C0Y0 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Ppp4r4Q8C0Y0 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Ppp4r4Q8C0Y0 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ppp4r4Q8C0Y0 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ppp4r4Q8C0Y0 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ppp4r4Q8C0Y0 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ppp4r4Q8C0Y0 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ppp4r4Q8C0Y0 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ppp4r4Q8C0Y0 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ppp4r4Q8C0Y0 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ppp4r4Q8C0Y0 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ppp4r4Q8C0Y0 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ppp4r4Q8C0Y0 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ppp4r4Q8C0Y0 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ppp4r4Q8C0Y0 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Ppp4r4Q8C0Y0 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ppp4r4Q8C0Y0 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ppp4r4Q8C0Y0 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.17■□□□□ 0.66
Ppp4r4Q8C0Y0 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ppp4r4Q8C0Y0 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ppp4r4Q8C0Y0 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ppp4r4Q8C0Y0 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ppp4r4Q8C0Y0 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ppp4r4Q8C0Y0 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Ppp4r4Q8C0Y0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ppp4r4Q8C0Y0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ppp4r4Q8C0Y0 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ppp4r4Q8C0Y0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ppp4r4Q8C0Y0 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ppp4r4Q8C0Y0 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ppp4r4Q8C0Y0 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Ppp4r4Q8C0Y0 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ppp4r4Q8C0Y0 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.16■□□□□ 0.66
Ppp4r4Q8C0Y0 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
Ppp4r4Q8C0Y0 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ppp4r4Q8C0Y0 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ppp4r4Q8C0Y0 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ppp4r4Q8C0Y0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ppp4r4Q8C0Y0 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ppp4r4Q8C0Y0 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ppp4r4Q8C0Y0 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ppp4r4Q8C0Y0 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.15■□□□□ 0.66
Ppp4r4Q8C0Y0 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Ppp4r4Q8C0Y0 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ppp4r4Q8C0Y0 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ppp4r4Q8C0Y0 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ppp4r4Q8C0Y0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ppp4r4Q8C0Y0 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ppp4r4Q8C0Y0 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.15■□□□□ 0.66
Ppp4r4Q8C0Y0 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ppp4r4Q8C0Y0 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ppp4r4Q8C0Y0 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ppp4r4Q8C0Y0 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.14■□□□□ 0.66
Ppp4r4Q8C0Y0 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ppp4r4Q8C0Y0 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ppp4r4Q8C0Y0 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.14■□□□□ 0.65
Ppp4r4Q8C0Y0 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Ppp4r4Q8C0Y0 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.14■□□□□ 0.65
Ppp4r4Q8C0Y0 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ppp4r4Q8C0Y0 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ppp4r4Q8C0Y0 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ppp4r4Q8C0Y0 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ppp4r4Q8C0Y0 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms