Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trub1Q8C0D0 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trub1Q8C0D0 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trub1Q8C0D0 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trub1Q8C0D0 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trub1Q8C0D0 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trub1Q8C0D0 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Trub1Q8C0D0 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.67■□□□□ 0.74
Trub1Q8C0D0 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.67■□□□□ 0.74
Trub1Q8C0D0 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trub1Q8C0D0 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trub1Q8C0D0 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trub1Q8C0D0 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trub1Q8C0D0 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trub1Q8C0D0 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trub1Q8C0D0 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.67■□□□□ 0.74
Trub1Q8C0D0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trub1Q8C0D0 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trub1Q8C0D0 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trub1Q8C0D0 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trub1Q8C0D0 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trub1Q8C0D0 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trub1Q8C0D0 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trub1Q8C0D0 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trub1Q8C0D0 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trub1Q8C0D0 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.66■□□□□ 0.74
Trub1Q8C0D0 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.66■□□□□ 0.74
Trub1Q8C0D0 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trub1Q8C0D0 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trub1Q8C0D0 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trub1Q8C0D0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trub1Q8C0D0 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.66■□□□□ 0.74
Trub1Q8C0D0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trub1Q8C0D0 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trub1Q8C0D0 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trub1Q8C0D0 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.65■□□□□ 0.74
Trub1Q8C0D0 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.65■□□□□ 0.74
Trub1Q8C0D0 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Trub1Q8C0D0 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trub1Q8C0D0 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.65■□□□□ 0.74
Trub1Q8C0D0 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trub1Q8C0D0 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Trub1Q8C0D0 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trub1Q8C0D0 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Trub1Q8C0D0 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trub1Q8C0D0 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trub1Q8C0D0 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trub1Q8C0D0 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Trub1Q8C0D0 Golph3-205ENSMUST00000228671 2842 ntBASIC19.65■□□□□ 0.74
Trub1Q8C0D0 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Trub1Q8C0D0 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.64■□□□□ 0.73
Trub1Q8C0D0 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trub1Q8C0D0 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trub1Q8C0D0 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.64■□□□□ 0.73
Trub1Q8C0D0 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trub1Q8C0D0 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trub1Q8C0D0 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trub1Q8C0D0 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trub1Q8C0D0 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trub1Q8C0D0 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trub1Q8C0D0 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trub1Q8C0D0 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.63■□□□□ 0.73
Trub1Q8C0D0 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.63■□□□□ 0.73
Trub1Q8C0D0 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trub1Q8C0D0 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.63■□□□□ 0.73
Trub1Q8C0D0 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Trub1Q8C0D0 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trub1Q8C0D0 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trub1Q8C0D0 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Trub1Q8C0D0 BC021767-201ENSMUST00000126387 1716 ntBASIC19.62■□□□□ 0.73
Trub1Q8C0D0 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trub1Q8C0D0 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trub1Q8C0D0 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Trub1Q8C0D0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trub1Q8C0D0 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trub1Q8C0D0 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Trub1Q8C0D0 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.62■□□□□ 0.73
Trub1Q8C0D0 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Trub1Q8C0D0 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trub1Q8C0D0 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trub1Q8C0D0 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Trub1Q8C0D0 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.62■□□□□ 0.73
Trub1Q8C0D0 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trub1Q8C0D0 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trub1Q8C0D0 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trub1Q8C0D0 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trub1Q8C0D0 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trub1Q8C0D0 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trub1Q8C0D0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trub1Q8C0D0 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trub1Q8C0D0 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trub1Q8C0D0 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trub1Q8C0D0 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trub1Q8C0D0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trub1Q8C0D0 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trub1Q8C0D0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trub1Q8C0D0 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trub1Q8C0D0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trub1Q8C0D0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Trub1Q8C0D0 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms