Protein–RNA interactions for Protein: Q8BTF7

Lig4, DNA ligase 4, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4Q8BTF7 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Lig4Q8BTF7 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lig4Q8BTF7 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Lig4Q8BTF7 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Lig4Q8BTF7 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lig4Q8BTF7 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lig4Q8BTF7 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Lig4Q8BTF7 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lig4Q8BTF7 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lig4Q8BTF7 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lig4Q8BTF7 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.16■□□□□ 0.82
Lig4Q8BTF7 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.16■□□□□ 0.82
Lig4Q8BTF7 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Lig4Q8BTF7 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lig4Q8BTF7 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lig4Q8BTF7 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lig4Q8BTF7 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.16■□□□□ 0.82
Lig4Q8BTF7 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lig4Q8BTF7 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lig4Q8BTF7 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lig4Q8BTF7 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Lig4Q8BTF7 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Lig4Q8BTF7 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lig4Q8BTF7 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.15■□□□□ 0.82
Lig4Q8BTF7 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Lig4Q8BTF7 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.15■□□□□ 0.82
Lig4Q8BTF7 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lig4Q8BTF7 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Lig4Q8BTF7 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Lig4Q8BTF7 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lig4Q8BTF7 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lig4Q8BTF7 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lig4Q8BTF7 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Lig4Q8BTF7 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Lig4Q8BTF7 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lig4Q8BTF7 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.14■□□□□ 0.81
Lig4Q8BTF7 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lig4Q8BTF7 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Lig4Q8BTF7 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Lig4Q8BTF7 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lig4Q8BTF7 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Lig4Q8BTF7 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lig4Q8BTF7 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lig4Q8BTF7 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Lig4Q8BTF7 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lig4Q8BTF7 Gm13534-201ENSMUST00000121169 513 ntBASIC20.13■□□□□ 0.81
Lig4Q8BTF7 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lig4Q8BTF7 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.13■□□□□ 0.81
Lig4Q8BTF7 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.13■□□□□ 0.81
Lig4Q8BTF7 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lig4Q8BTF7 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Lig4Q8BTF7 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lig4Q8BTF7 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lig4Q8BTF7 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lig4Q8BTF7 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
Lig4Q8BTF7 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.12■□□□□ 0.81
Lig4Q8BTF7 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Lig4Q8BTF7 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lig4Q8BTF7 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Lig4Q8BTF7 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Lig4Q8BTF7 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Lig4Q8BTF7 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lig4Q8BTF7 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lig4Q8BTF7 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lig4Q8BTF7 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.11■□□□□ 0.81
Lig4Q8BTF7 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.11■□□□□ 0.81
Lig4Q8BTF7 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.11■□□□□ 0.81
Lig4Q8BTF7 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Lig4Q8BTF7 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lig4Q8BTF7 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lig4Q8BTF7 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lig4Q8BTF7 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lig4Q8BTF7 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Lig4Q8BTF7 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lig4Q8BTF7 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
Lig4Q8BTF7 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lig4Q8BTF7 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.1■□□□□ 0.81
Lig4Q8BTF7 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lig4Q8BTF7 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Lig4Q8BTF7 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lig4Q8BTF7 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lig4Q8BTF7 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lig4Q8BTF7 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lig4Q8BTF7 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.09■□□□□ 0.81
Lig4Q8BTF7 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lig4Q8BTF7 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Lig4Q8BTF7 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Lig4Q8BTF7 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lig4Q8BTF7 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lig4Q8BTF7 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Lig4Q8BTF7 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Lig4Q8BTF7 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lig4Q8BTF7 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lig4Q8BTF7 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lig4Q8BTF7 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Lig4Q8BTF7 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lig4Q8BTF7 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lig4Q8BTF7 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lig4Q8BTF7 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Lig4Q8BTF7 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms