Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Cpne3Q8BT60 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.33■□□□□ 0.52
Cpne3Q8BT60 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.33■□□□□ 0.52
Cpne3Q8BT60 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.33■□□□□ 0.52
Cpne3Q8BT60 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.33■□□□□ 0.52
Cpne3Q8BT60 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Cpne3Q8BT60 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cpne3Q8BT60 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.52
Cpne3Q8BT60 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cpne3Q8BT60 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cpne3Q8BT60 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cpne3Q8BT60 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cpne3Q8BT60 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpne3Q8BT60 Golph3-205ENSMUST00000228671 2842 ntBASIC18.32■□□□□ 0.52
Cpne3Q8BT60 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cpne3Q8BT60 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpne3Q8BT60 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpne3Q8BT60 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpne3Q8BT60 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpne3Q8BT60 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpne3Q8BT60 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpne3Q8BT60 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.32■□□□□ 0.52
Cpne3Q8BT60 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cpne3Q8BT60 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.32■□□□□ 0.52
Cpne3Q8BT60 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Cpne3Q8BT60 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpne3Q8BT60 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpne3Q8BT60 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cpne3Q8BT60 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cpne3Q8BT60 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpne3Q8BT60 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cpne3Q8BT60 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpne3Q8BT60 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpne3Q8BT60 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cpne3Q8BT60 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpne3Q8BT60 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cpne3Q8BT60 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.31■□□□□ 0.52
Cpne3Q8BT60 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Cpne3Q8BT60 Spcs1-204ENSMUST00000226782 949 ntBASIC18.31■□□□□ 0.52
Cpne3Q8BT60 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cpne3Q8BT60 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpne3Q8BT60 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Cpne3Q8BT60 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpne3Q8BT60 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpne3Q8BT60 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Cpne3Q8BT60 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Cpne3Q8BT60 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpne3Q8BT60 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpne3Q8BT60 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.31■□□□□ 0.52
Cpne3Q8BT60 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpne3Q8BT60 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Cpne3Q8BT60 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpne3Q8BT60 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Cpne3Q8BT60 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.3■□□□□ 0.52
Cpne3Q8BT60 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Cpne3Q8BT60 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpne3Q8BT60 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpne3Q8BT60 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.3■□□□□ 0.52
Cpne3Q8BT60 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.3■□□□□ 0.52
Cpne3Q8BT60 Gm13241-201ENSMUST00000094493 780 ntBASIC18.3■□□□□ 0.52
Cpne3Q8BT60 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpne3Q8BT60 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpne3Q8BT60 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Cpne3Q8BT60 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpne3Q8BT60 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpne3Q8BT60 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpne3Q8BT60 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpne3Q8BT60 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpne3Q8BT60 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cpne3Q8BT60 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cpne3Q8BT60 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cpne3Q8BT60 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cpne3Q8BT60 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpne3Q8BT60 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpne3Q8BT60 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpne3Q8BT60 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpne3Q8BT60 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpne3Q8BT60 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpne3Q8BT60 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpne3Q8BT60 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpne3Q8BT60 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cpne3Q8BT60 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpne3Q8BT60 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cpne3Q8BT60 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.27■□□□□ 0.52
Cpne3Q8BT60 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Cpne3Q8BT60 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.27■□□□□ 0.52
Cpne3Q8BT60 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cpne3Q8BT60 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cpne3Q8BT60 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cpne3Q8BT60 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Cpne3Q8BT60 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cpne3Q8BT60 Gm21956-201ENSMUST00000179946 522 ntBASIC18.27■□□□□ 0.52
Cpne3Q8BT60 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.27■□□□□ 0.52
Cpne3Q8BT60 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Cpne3Q8BT60 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.27■□□□□ 0.52
Cpne3Q8BT60 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Cpne3Q8BT60 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cpne3Q8BT60 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.27■□□□□ 0.51
Cpne3Q8BT60 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cpne3Q8BT60 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms