Protein–RNA interactions for Protein: Q8BSQ9

Pbrm1, Protein polybromo-1, mousemouse

Known RBP Predictions only

Length 1,634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pbrm1Q8BSQ9 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC30.35■■■□□ 2.45
Pbrm1Q8BSQ9 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Pbrm1Q8BSQ9 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Pbrm1Q8BSQ9 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Pbrm1Q8BSQ9 Gm21814-202ENSMUST00000203277 873 ntBASIC30.34■■■□□ 2.45
Pbrm1Q8BSQ9 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Pbrm1Q8BSQ9 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Pbrm1Q8BSQ9 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Pbrm1Q8BSQ9 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC30.33■■■□□ 2.45
Pbrm1Q8BSQ9 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC30.33■■■□□ 2.45
Pbrm1Q8BSQ9 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Pbrm1Q8BSQ9 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Pbrm1Q8BSQ9 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Pbrm1Q8BSQ9 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC30.33■■■□□ 2.45
Pbrm1Q8BSQ9 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC30.33■■■□□ 2.45
Pbrm1Q8BSQ9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC30.33■■■□□ 2.45
Pbrm1Q8BSQ9 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Pbrm1Q8BSQ9 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Pbrm1Q8BSQ9 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Pbrm1Q8BSQ9 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC30.33■■■□□ 2.45
Pbrm1Q8BSQ9 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC30.32■■■□□ 2.44
Pbrm1Q8BSQ9 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC30.32■■■□□ 2.44
Pbrm1Q8BSQ9 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC30.32■■■□□ 2.44
Pbrm1Q8BSQ9 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC30.32■■■□□ 2.44
Pbrm1Q8BSQ9 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC30.32■■■□□ 2.44
Pbrm1Q8BSQ9 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC30.32■■■□□ 2.44
Pbrm1Q8BSQ9 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC30.32■■■□□ 2.44
Pbrm1Q8BSQ9 Gm19094-201ENSMUST00000209791 1246 ntBASIC30.32■■■□□ 2.44
Pbrm1Q8BSQ9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Pbrm1Q8BSQ9 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
Pbrm1Q8BSQ9 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC30.31■■■□□ 2.44
Pbrm1Q8BSQ9 Gm11927-201ENSMUST00000118472 759 ntBASIC30.3■■■□□ 2.44
Pbrm1Q8BSQ9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC30.3■■■□□ 2.44
Pbrm1Q8BSQ9 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC30.3■■■□□ 2.44
Pbrm1Q8BSQ9 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Pbrm1Q8BSQ9 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
Pbrm1Q8BSQ9 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Pbrm1Q8BSQ9 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Pbrm1Q8BSQ9 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
Pbrm1Q8BSQ9 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
Pbrm1Q8BSQ9 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Pbrm1Q8BSQ9 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC30.29■■■□□ 2.44
Pbrm1Q8BSQ9 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Pbrm1Q8BSQ9 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC30.29■■■□□ 2.44
Pbrm1Q8BSQ9 Gm26766-202ENSMUST00000227544 2347 ntBASIC30.28■■■□□ 2.44
Pbrm1Q8BSQ9 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC30.28■■■□□ 2.44
Pbrm1Q8BSQ9 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Pbrm1Q8BSQ9 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC30.27■■■□□ 2.44
Pbrm1Q8BSQ9 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
Pbrm1Q8BSQ9 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
Pbrm1Q8BSQ9 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
Pbrm1Q8BSQ9 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC30.26■■■□□ 2.44
Pbrm1Q8BSQ9 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC30.26■■■□□ 2.44
Pbrm1Q8BSQ9 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC30.26■■■□□ 2.44
Pbrm1Q8BSQ9 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC30.26■■■□□ 2.44
Pbrm1Q8BSQ9 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Pbrm1Q8BSQ9 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Pbrm1Q8BSQ9 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Pbrm1Q8BSQ9 Gm16042-201ENSMUST00000204813 1247 ntBASIC30.25■■■□□ 2.43
Pbrm1Q8BSQ9 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Pbrm1Q8BSQ9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
Pbrm1Q8BSQ9 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC30.25■■■□□ 2.43
Pbrm1Q8BSQ9 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Pbrm1Q8BSQ9 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Pbrm1Q8BSQ9 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC30.24■■■□□ 2.43
Pbrm1Q8BSQ9 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC30.24■■■□□ 2.43
Pbrm1Q8BSQ9 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
Pbrm1Q8BSQ9 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Pbrm1Q8BSQ9 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC30.24■■■□□ 2.43
Pbrm1Q8BSQ9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC30.23■■■□□ 2.43
Pbrm1Q8BSQ9 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Pbrm1Q8BSQ9 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
Pbrm1Q8BSQ9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC30.23■■■□□ 2.43
Pbrm1Q8BSQ9 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Pbrm1Q8BSQ9 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Pbrm1Q8BSQ9 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Pbrm1Q8BSQ9 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC30.22■■■□□ 2.43
Pbrm1Q8BSQ9 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Pbrm1Q8BSQ9 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC30.22■■■□□ 2.43
Pbrm1Q8BSQ9 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC30.22■■■□□ 2.43
Pbrm1Q8BSQ9 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
Pbrm1Q8BSQ9 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Pbrm1Q8BSQ9 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Pbrm1Q8BSQ9 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC30.21■■■□□ 2.43
Pbrm1Q8BSQ9 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Pbrm1Q8BSQ9 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Pbrm1Q8BSQ9 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC30.21■■■□□ 2.43
Pbrm1Q8BSQ9 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC30.21■■■□□ 2.43
Pbrm1Q8BSQ9 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Pbrm1Q8BSQ9 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Pbrm1Q8BSQ9 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Pbrm1Q8BSQ9 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Pbrm1Q8BSQ9 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Pbrm1Q8BSQ9 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Pbrm1Q8BSQ9 Arhgef4-208ENSMUST00000211073 171 ntBASIC30.2■■■□□ 2.43
Pbrm1Q8BSQ9 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC30.2■■■□□ 2.42
Pbrm1Q8BSQ9 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Pbrm1Q8BSQ9 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Pbrm1Q8BSQ9 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Pbrm1Q8BSQ9 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms