Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Smco3Q8BQM7 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Smco3Q8BQM7 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smco3Q8BQM7 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smco3Q8BQM7 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Smco3Q8BQM7 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smco3Q8BQM7 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Smco3Q8BQM7 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smco3Q8BQM7 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Smco3Q8BQM7 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smco3Q8BQM7 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smco3Q8BQM7 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.68■□□□□ 0.1
Smco3Q8BQM7 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Smco3Q8BQM7 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smco3Q8BQM7 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smco3Q8BQM7 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC15.68■□□□□ 0.1
Smco3Q8BQM7 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Smco3Q8BQM7 Gm10399-202ENSMUST00000202768 748 ntBASIC15.68■□□□□ 0.1
Smco3Q8BQM7 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Smco3Q8BQM7 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smco3Q8BQM7 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Smco3Q8BQM7 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Smco3Q8BQM7 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smco3Q8BQM7 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.68■□□□□ 0.1
Smco3Q8BQM7 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smco3Q8BQM7 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smco3Q8BQM7 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smco3Q8BQM7 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smco3Q8BQM7 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smco3Q8BQM7 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Smco3Q8BQM7 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smco3Q8BQM7 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smco3Q8BQM7 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smco3Q8BQM7 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smco3Q8BQM7 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Smco3Q8BQM7 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smco3Q8BQM7 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
Smco3Q8BQM7 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smco3Q8BQM7 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.66■□□□□ 0.1
Smco3Q8BQM7 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smco3Q8BQM7 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smco3Q8BQM7 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smco3Q8BQM7 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.66■□□□□ 0.1
Smco3Q8BQM7 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smco3Q8BQM7 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smco3Q8BQM7 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC15.66■□□□□ 0.1
Smco3Q8BQM7 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC15.66■□□□□ 0.1
Smco3Q8BQM7 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smco3Q8BQM7 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smco3Q8BQM7 Mir6236-201ENSMUST00000184437 123 ntBASIC15.66■□□□□ 0.1
Smco3Q8BQM7 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC15.66■□□□□ 0.1
Smco3Q8BQM7 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smco3Q8BQM7 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smco3Q8BQM7 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smco3Q8BQM7 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smco3Q8BQM7 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.65■□□□□ 0.1
Smco3Q8BQM7 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Smco3Q8BQM7 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Smco3Q8BQM7 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.65■□□□□ 0.1
Smco3Q8BQM7 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smco3Q8BQM7 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smco3Q8BQM7 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Smco3Q8BQM7 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smco3Q8BQM7 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Smco3Q8BQM7 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smco3Q8BQM7 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Smco3Q8BQM7 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smco3Q8BQM7 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smco3Q8BQM7 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smco3Q8BQM7 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Smco3Q8BQM7 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smco3Q8BQM7 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smco3Q8BQM7 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smco3Q8BQM7 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Smco3Q8BQM7 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Smco3Q8BQM7 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smco3Q8BQM7 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.64■□□□□ 0.09
Smco3Q8BQM7 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smco3Q8BQM7 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Smco3Q8BQM7 Gm45444-201ENSMUST00000211394 898 ntBASIC15.64■□□□□ 0.09
Smco3Q8BQM7 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC15.64■□□□□ 0.09
Smco3Q8BQM7 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smco3Q8BQM7 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smco3Q8BQM7 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Smco3Q8BQM7 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smco3Q8BQM7 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Smco3Q8BQM7 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Smco3Q8BQM7 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Smco3Q8BQM7 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smco3Q8BQM7 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Smco3Q8BQM7 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smco3Q8BQM7 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smco3Q8BQM7 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Smco3Q8BQM7 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC15.63■□□□□ 0.09
Smco3Q8BQM7 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Smco3Q8BQM7 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Smco3Q8BQM7 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
Smco3Q8BQM7 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Smco3Q8BQM7 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Smco3Q8BQM7 Gm7143-201ENSMUST00000222811 859 ntBASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms