Protein–RNA interactions for Protein: Q8BKS9

Pum3, Pumilio homolog 3, mousemouse

Known RBP Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pum3Q8BKS9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pum3Q8BKS9 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.17■□□□□ 0.82
Pum3Q8BKS9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pum3Q8BKS9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pum3Q8BKS9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pum3Q8BKS9 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Pum3Q8BKS9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pum3Q8BKS9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pum3Q8BKS9 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Pum3Q8BKS9 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.16■□□□□ 0.82
Pum3Q8BKS9 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pum3Q8BKS9 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pum3Q8BKS9 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pum3Q8BKS9 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Pum3Q8BKS9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pum3Q8BKS9 Golph3-202ENSMUST00000226517 2359 ntBASIC20.15■□□□□ 0.82
Pum3Q8BKS9 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.15■□□□□ 0.82
Pum3Q8BKS9 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Pum3Q8BKS9 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Pum3Q8BKS9 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pum3Q8BKS9 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Pum3Q8BKS9 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pum3Q8BKS9 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pum3Q8BKS9 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Pum3Q8BKS9 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Pum3Q8BKS9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pum3Q8BKS9 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.14■□□□□ 0.81
Pum3Q8BKS9 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.14■□□□□ 0.81
Pum3Q8BKS9 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pum3Q8BKS9 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pum3Q8BKS9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.14■□□□□ 0.81
Pum3Q8BKS9 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pum3Q8BKS9 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pum3Q8BKS9 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.14■□□□□ 0.81
Pum3Q8BKS9 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pum3Q8BKS9 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pum3Q8BKS9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pum3Q8BKS9 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.13■□□□□ 0.81
Pum3Q8BKS9 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.13■□□□□ 0.81
Pum3Q8BKS9 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.13■□□□□ 0.81
Pum3Q8BKS9 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.13■□□□□ 0.81
Pum3Q8BKS9 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pum3Q8BKS9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pum3Q8BKS9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pum3Q8BKS9 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pum3Q8BKS9 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pum3Q8BKS9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pum3Q8BKS9 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Pum3Q8BKS9 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pum3Q8BKS9 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pum3Q8BKS9 Gm13146-201ENSMUST00000118508 780 ntBASIC20.12■□□□□ 0.81
Pum3Q8BKS9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pum3Q8BKS9 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pum3Q8BKS9 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pum3Q8BKS9 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Pum3Q8BKS9 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pum3Q8BKS9 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.11■□□□□ 0.81
Pum3Q8BKS9 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pum3Q8BKS9 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pum3Q8BKS9 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pum3Q8BKS9 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pum3Q8BKS9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pum3Q8BKS9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pum3Q8BKS9 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
Pum3Q8BKS9 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pum3Q8BKS9 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pum3Q8BKS9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.1■□□□□ 0.81
Pum3Q8BKS9 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Pum3Q8BKS9 Gm26571-201ENSMUST00000181399 666 ntBASIC20.1■□□□□ 0.81
Pum3Q8BKS9 AV356131-201ENSMUST00000206201 750 ntBASIC20.1■□□□□ 0.81
Pum3Q8BKS9 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.1■□□□□ 0.81
Pum3Q8BKS9 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pum3Q8BKS9 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Pum3Q8BKS9 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pum3Q8BKS9 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pum3Q8BKS9 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pum3Q8BKS9 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Pum3Q8BKS9 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Pum3Q8BKS9 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pum3Q8BKS9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pum3Q8BKS9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pum3Q8BKS9 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Pum3Q8BKS9 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.09■□□□□ 0.81
Pum3Q8BKS9 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pum3Q8BKS9 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pum3Q8BKS9 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pum3Q8BKS9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pum3Q8BKS9 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pum3Q8BKS9 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.09■□□□□ 0.81
Pum3Q8BKS9 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pum3Q8BKS9 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.08■□□□□ 0.81
Pum3Q8BKS9 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pum3Q8BKS9 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.08■□□□□ 0.81
Pum3Q8BKS9 Gm42569-201ENSMUST00000200539 472 ntBASIC20.08■□□□□ 0.81
Pum3Q8BKS9 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pum3Q8BKS9 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pum3Q8BKS9 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.08■□□□□ 0.8
Pum3Q8BKS9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pum3Q8BKS9 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pum3Q8BKS9 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms