Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Depdc1bQ8BH88 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Depdc1bQ8BH88 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Depdc1bQ8BH88 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Depdc1bQ8BH88 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Depdc1bQ8BH88 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Depdc1bQ8BH88 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Depdc1bQ8BH88 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Depdc1bQ8BH88 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Depdc1bQ8BH88 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Depdc1bQ8BH88 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.63■□□□□ 0.89
Depdc1bQ8BH88 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Depdc1bQ8BH88 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Depdc1bQ8BH88 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Depdc1bQ8BH88 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.63■□□□□ 0.89
Depdc1bQ8BH88 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Depdc1bQ8BH88 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Depdc1bQ8BH88 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.63■□□□□ 0.89
Depdc1bQ8BH88 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.63■□□□□ 0.89
Depdc1bQ8BH88 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.63■□□□□ 0.89
Depdc1bQ8BH88 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.63■□□□□ 0.89
Depdc1bQ8BH88 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Depdc1bQ8BH88 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Depdc1bQ8BH88 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Depdc1bQ8BH88 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Depdc1bQ8BH88 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Depdc1bQ8BH88 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Depdc1bQ8BH88 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Depdc1bQ8BH88 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Depdc1bQ8BH88 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Depdc1bQ8BH88 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Depdc1bQ8BH88 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Depdc1bQ8BH88 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Depdc1bQ8BH88 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.62■□□□□ 0.89
Depdc1bQ8BH88 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Depdc1bQ8BH88 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Depdc1bQ8BH88 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Depdc1bQ8BH88 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Depdc1bQ8BH88 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Depdc1bQ8BH88 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Depdc1bQ8BH88 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Depdc1bQ8BH88 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.61■□□□□ 0.89
Depdc1bQ8BH88 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Depdc1bQ8BH88 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Depdc1bQ8BH88 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.61■□□□□ 0.89
Depdc1bQ8BH88 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.61■□□□□ 0.89
Depdc1bQ8BH88 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Depdc1bQ8BH88 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Depdc1bQ8BH88 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Depdc1bQ8BH88 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Depdc1bQ8BH88 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Depdc1bQ8BH88 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Depdc1bQ8BH88 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Depdc1bQ8BH88 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Depdc1bQ8BH88 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Depdc1bQ8BH88 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Depdc1bQ8BH88 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Depdc1bQ8BH88 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
Depdc1bQ8BH88 Gm11421-201ENSMUST00000122124 294 ntBASIC20.6■□□□□ 0.89
Depdc1bQ8BH88 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.6■□□□□ 0.89
Depdc1bQ8BH88 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Depdc1bQ8BH88 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Depdc1bQ8BH88 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.6■□□□□ 0.89
Depdc1bQ8BH88 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Depdc1bQ8BH88 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Depdc1bQ8BH88 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Depdc1bQ8BH88 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.6■□□□□ 0.89
Depdc1bQ8BH88 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Depdc1bQ8BH88 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Depdc1bQ8BH88 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Depdc1bQ8BH88 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Depdc1bQ8BH88 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Depdc1bQ8BH88 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Depdc1bQ8BH88 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.59■□□□□ 0.89
Depdc1bQ8BH88 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Depdc1bQ8BH88 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Depdc1bQ8BH88 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Depdc1bQ8BH88 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Depdc1bQ8BH88 Gm7291-201ENSMUST00000199147 382 ntBASIC20.58■□□□□ 0.89
Depdc1bQ8BH88 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Depdc1bQ8BH88 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Depdc1bQ8BH88 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Depdc1bQ8BH88 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Depdc1bQ8BH88 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Depdc1bQ8BH88 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Depdc1bQ8BH88 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Depdc1bQ8BH88 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Depdc1bQ8BH88 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Depdc1bQ8BH88 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.57■□□□□ 0.88
Depdc1bQ8BH88 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Depdc1bQ8BH88 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.57■□□□□ 0.88
Depdc1bQ8BH88 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Depdc1bQ8BH88 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Depdc1bQ8BH88 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Depdc1bQ8BH88 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Depdc1bQ8BH88 Gm42569-201ENSMUST00000200539 472 ntBASIC20.57■□□□□ 0.88
Depdc1bQ8BH88 Gm42642-201ENSMUST00000200683 355 ntBASIC20.57■□□□□ 0.88
Depdc1bQ8BH88 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Depdc1bQ8BH88 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Depdc1bQ8BH88 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms