Protein–RNA interactions for Protein: Q8BGR5

Fam53b, Protein FAM53B, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam53bQ8BGR5 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fam53bQ8BGR5 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fam53bQ8BGR5 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fam53bQ8BGR5 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
Fam53bQ8BGR5 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.8■□□□□ 0.28
Fam53bQ8BGR5 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Fam53bQ8BGR5 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Fam53bQ8BGR5 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fam53bQ8BGR5 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fam53bQ8BGR5 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fam53bQ8BGR5 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Fam53bQ8BGR5 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Fam53bQ8BGR5 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fam53bQ8BGR5 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Fam53bQ8BGR5 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fam53bQ8BGR5 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fam53bQ8BGR5 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Fam53bQ8BGR5 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Fam53bQ8BGR5 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fam53bQ8BGR5 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fam53bQ8BGR5 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fam53bQ8BGR5 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fam53bQ8BGR5 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fam53bQ8BGR5 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Fam53bQ8BGR5 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Fam53bQ8BGR5 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fam53bQ8BGR5 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Fam53bQ8BGR5 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Fam53bQ8BGR5 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Fam53bQ8BGR5 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Fam53bQ8BGR5 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fam53bQ8BGR5 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.78■□□□□ 0.28
Fam53bQ8BGR5 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.78■□□□□ 0.28
Fam53bQ8BGR5 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.78■□□□□ 0.28
Fam53bQ8BGR5 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Fam53bQ8BGR5 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fam53bQ8BGR5 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Fam53bQ8BGR5 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.78■□□□□ 0.28
Fam53bQ8BGR5 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.78■□□□□ 0.28
Fam53bQ8BGR5 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Fam53bQ8BGR5 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Fam53bQ8BGR5 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Fam53bQ8BGR5 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.77■□□□□ 0.28
Fam53bQ8BGR5 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.77■□□□□ 0.28
Fam53bQ8BGR5 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Fam53bQ8BGR5 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.77■□□□□ 0.28
Fam53bQ8BGR5 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Fam53bQ8BGR5 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Fam53bQ8BGR5 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Fam53bQ8BGR5 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Fam53bQ8BGR5 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Fam53bQ8BGR5 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Fam53bQ8BGR5 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Fam53bQ8BGR5 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Fam53bQ8BGR5 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Fam53bQ8BGR5 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Fam53bQ8BGR5 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Fam53bQ8BGR5 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Fam53bQ8BGR5 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Fam53bQ8BGR5 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Fam53bQ8BGR5 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.76■□□□□ 0.27
Fam53bQ8BGR5 Gm7860-201ENSMUST00000121190 879 ntBASIC16.76■□□□□ 0.27
Fam53bQ8BGR5 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Fam53bQ8BGR5 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Fam53bQ8BGR5 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.76■□□□□ 0.27
Fam53bQ8BGR5 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Fam53bQ8BGR5 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Fam53bQ8BGR5 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Fam53bQ8BGR5 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Fam53bQ8BGR5 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Fam53bQ8BGR5 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Fam53bQ8BGR5 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Fam53bQ8BGR5 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Fam53bQ8BGR5 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Fam53bQ8BGR5 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Fam53bQ8BGR5 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Fam53bQ8BGR5 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Fam53bQ8BGR5 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Fam53bQ8BGR5 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.75■□□□□ 0.27
Fam53bQ8BGR5 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.75■□□□□ 0.27
Fam53bQ8BGR5 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.75■□□□□ 0.27
Fam53bQ8BGR5 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Fam53bQ8BGR5 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.75■□□□□ 0.27
Fam53bQ8BGR5 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Fam53bQ8BGR5 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Fam53bQ8BGR5 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Fam53bQ8BGR5 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Fam53bQ8BGR5 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Fam53bQ8BGR5 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Fam53bQ8BGR5 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Fam53bQ8BGR5 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Fam53bQ8BGR5 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Fam53bQ8BGR5 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Fam53bQ8BGR5 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Fam53bQ8BGR5 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.74■□□□□ 0.27
Fam53bQ8BGR5 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Fam53bQ8BGR5 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Fam53bQ8BGR5 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Fam53bQ8BGR5 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Fam53bQ8BGR5 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms