Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Samm50Q8BGH2 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Samm50Q8BGH2 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Samm50Q8BGH2 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Samm50Q8BGH2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Samm50Q8BGH2 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
Samm50Q8BGH2 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Samm50Q8BGH2 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Samm50Q8BGH2 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Samm50Q8BGH2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC22.25■■□□□ 1.15
Samm50Q8BGH2 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Samm50Q8BGH2 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Samm50Q8BGH2 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Samm50Q8BGH2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC22.24■■□□□ 1.15
Samm50Q8BGH2 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Samm50Q8BGH2 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Samm50Q8BGH2 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Samm50Q8BGH2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Samm50Q8BGH2 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Samm50Q8BGH2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Samm50Q8BGH2 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
Samm50Q8BGH2 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Samm50Q8BGH2 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Samm50Q8BGH2 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Samm50Q8BGH2 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC22.23■■□□□ 1.15
Samm50Q8BGH2 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC22.23■■□□□ 1.15
Samm50Q8BGH2 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Samm50Q8BGH2 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Samm50Q8BGH2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Samm50Q8BGH2 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Samm50Q8BGH2 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Samm50Q8BGH2 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Samm50Q8BGH2 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Samm50Q8BGH2 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Samm50Q8BGH2 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Samm50Q8BGH2 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Samm50Q8BGH2 Cdc34b-202ENSMUST00000188741 1252 ntBASIC22.22■■□□□ 1.15
Samm50Q8BGH2 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Samm50Q8BGH2 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Samm50Q8BGH2 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Samm50Q8BGH2 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Samm50Q8BGH2 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Samm50Q8BGH2 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
Samm50Q8BGH2 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Samm50Q8BGH2 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Samm50Q8BGH2 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Samm50Q8BGH2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Samm50Q8BGH2 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Samm50Q8BGH2 Smad6-203ENSMUST00000179458 273 ntBASIC22.21■■□□□ 1.15
Samm50Q8BGH2 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Samm50Q8BGH2 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Samm50Q8BGH2 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Samm50Q8BGH2 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Samm50Q8BGH2 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC22.21■■□□□ 1.15
Samm50Q8BGH2 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC22.2■■□□□ 1.15
Samm50Q8BGH2 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Samm50Q8BGH2 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC22.2■■□□□ 1.14
Samm50Q8BGH2 Gm40848-201ENSMUST00000221998 324 ntBASIC22.2■■□□□ 1.14
Samm50Q8BGH2 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Samm50Q8BGH2 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC22.2■■□□□ 1.14
Samm50Q8BGH2 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC22.2■■□□□ 1.14
Samm50Q8BGH2 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Samm50Q8BGH2 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Samm50Q8BGH2 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Samm50Q8BGH2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC22.19■■□□□ 1.14
Samm50Q8BGH2 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Samm50Q8BGH2 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Samm50Q8BGH2 Fam105a-203ENSMUST00000226170 3043 ntBASIC22.19■■□□□ 1.14
Samm50Q8BGH2 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Samm50Q8BGH2 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC22.19■■□□□ 1.14
Samm50Q8BGH2 AC165080.2-201ENSMUST00000217491 1530 ntBASIC22.19■■□□□ 1.14
Samm50Q8BGH2 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Samm50Q8BGH2 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Samm50Q8BGH2 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Samm50Q8BGH2 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Samm50Q8BGH2 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Samm50Q8BGH2 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Samm50Q8BGH2 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Samm50Q8BGH2 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Samm50Q8BGH2 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Samm50Q8BGH2 Gm45640-201ENSMUST00000210665 1896 ntBASIC22.18■■□□□ 1.14
Samm50Q8BGH2 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Samm50Q8BGH2 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC22.18■■□□□ 1.14
Samm50Q8BGH2 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Samm50Q8BGH2 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Samm50Q8BGH2 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Samm50Q8BGH2 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Samm50Q8BGH2 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Samm50Q8BGH2 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Samm50Q8BGH2 AA386476-201ENSMUST00000098781 1665 ntBASIC22.17■■□□□ 1.14
Samm50Q8BGH2 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Samm50Q8BGH2 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC22.17■■□□□ 1.14
Samm50Q8BGH2 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Samm50Q8BGH2 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Samm50Q8BGH2 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC22.17■■□□□ 1.14
Samm50Q8BGH2 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC22.17■■□□□ 1.14
Samm50Q8BGH2 Gm43060-201ENSMUST00000200621 289 ntBASIC22.17■■□□□ 1.14
Samm50Q8BGH2 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Samm50Q8BGH2 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Samm50Q8BGH2 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms