Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim50Q810I2 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim50Q810I2 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Trim50Q810I2 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim50Q810I2 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim50Q810I2 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim50Q810I2 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim50Q810I2 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.54■□□□□ 0.56
Trim50Q810I2 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Trim50Q810I2 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim50Q810I2 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim50Q810I2 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim50Q810I2 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim50Q810I2 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Trim50Q810I2 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim50Q810I2 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim50Q810I2 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim50Q810I2 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim50Q810I2 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim50Q810I2 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim50Q810I2 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.53■□□□□ 0.56
Trim50Q810I2 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim50Q810I2 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim50Q810I2 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim50Q810I2 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim50Q810I2 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim50Q810I2 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim50Q810I2 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.53■□□□□ 0.56
Trim50Q810I2 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim50Q810I2 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim50Q810I2 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trim50Q810I2 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
Trim50Q810I2 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Trim50Q810I2 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim50Q810I2 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim50Q810I2 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trim50Q810I2 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Trim50Q810I2 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Trim50Q810I2 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trim50Q810I2 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trim50Q810I2 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trim50Q810I2 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trim50Q810I2 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.52■□□□□ 0.55
Trim50Q810I2 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Trim50Q810I2 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trim50Q810I2 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim50Q810I2 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim50Q810I2 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.51■□□□□ 0.55
Trim50Q810I2 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim50Q810I2 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.51■□□□□ 0.55
Trim50Q810I2 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim50Q810I2 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim50Q810I2 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.51■□□□□ 0.55
Trim50Q810I2 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Trim50Q810I2 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.51■□□□□ 0.55
Trim50Q810I2 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim50Q810I2 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim50Q810I2 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim50Q810I2 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Trim50Q810I2 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim50Q810I2 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
Trim50Q810I2 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim50Q810I2 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Trim50Q810I2 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.51■□□□□ 0.55
Trim50Q810I2 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim50Q810I2 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim50Q810I2 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trim50Q810I2 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Trim50Q810I2 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Trim50Q810I2 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Trim50Q810I2 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trim50Q810I2 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim50Q810I2 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.5■□□□□ 0.55
Trim50Q810I2 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.5■□□□□ 0.55
Trim50Q810I2 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim50Q810I2 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Trim50Q810I2 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim50Q810I2 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim50Q810I2 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim50Q810I2 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trim50Q810I2 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim50Q810I2 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trim50Q810I2 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim50Q810I2 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim50Q810I2 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Trim50Q810I2 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Trim50Q810I2 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trim50Q810I2 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.49■□□□□ 0.55
Trim50Q810I2 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trim50Q810I2 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
Trim50Q810I2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim50Q810I2 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
Trim50Q810I2 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trim50Q810I2 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim50Q810I2 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim50Q810I2 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trim50Q810I2 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim50Q810I2 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.48■□□□□ 0.55
Trim50Q810I2 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trim50Q810I2 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms