Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vrk1Q80X41 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.17■□□□□ 0.5
Vrk1Q80X41 Gm22240-201ENSMUST00000175225 82 ntBASIC18.17■□□□□ 0.5
Vrk1Q80X41 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.17■□□□□ 0.5
Vrk1Q80X41 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Vrk1Q80X41 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Vrk1Q80X41 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Vrk1Q80X41 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Vrk1Q80X41 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vrk1Q80X41 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.17■□□□□ 0.5
Vrk1Q80X41 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vrk1Q80X41 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vrk1Q80X41 Gm7860-201ENSMUST00000121190 879 ntBASIC18.16■□□□□ 0.5
Vrk1Q80X41 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Vrk1Q80X41 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vrk1Q80X41 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vrk1Q80X41 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vrk1Q80X41 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vrk1Q80X41 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Vrk1Q80X41 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Vrk1Q80X41 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vrk1Q80X41 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vrk1Q80X41 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Vrk1Q80X41 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.15■□□□□ 0.5
Vrk1Q80X41 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Vrk1Q80X41 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Vrk1Q80X41 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vrk1Q80X41 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vrk1Q80X41 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vrk1Q80X41 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vrk1Q80X41 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vrk1Q80X41 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vrk1Q80X41 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vrk1Q80X41 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Vrk1Q80X41 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vrk1Q80X41 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Vrk1Q80X41 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
Vrk1Q80X41 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Vrk1Q80X41 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.14■□□□□ 0.49
Vrk1Q80X41 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vrk1Q80X41 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Vrk1Q80X41 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vrk1Q80X41 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vrk1Q80X41 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Vrk1Q80X41 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.14■□□□□ 0.49
Vrk1Q80X41 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.14■□□□□ 0.49
Vrk1Q80X41 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vrk1Q80X41 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Vrk1Q80X41 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vrk1Q80X41 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vrk1Q80X41 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vrk1Q80X41 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Vrk1Q80X41 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Vrk1Q80X41 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Vrk1Q80X41 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vrk1Q80X41 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.13■□□□□ 0.49
Vrk1Q80X41 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Vrk1Q80X41 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Vrk1Q80X41 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Vrk1Q80X41 Gm8520-201ENSMUST00000186517 868 ntBASIC18.13■□□□□ 0.49
Vrk1Q80X41 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vrk1Q80X41 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Vrk1Q80X41 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vrk1Q80X41 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vrk1Q80X41 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vrk1Q80X41 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vrk1Q80X41 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vrk1Q80X41 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Vrk1Q80X41 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.12■□□□□ 0.49
Vrk1Q80X41 Gm20049-201ENSMUST00000219950 730 ntBASIC18.12■□□□□ 0.49
Vrk1Q80X41 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Vrk1Q80X41 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vrk1Q80X41 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vrk1Q80X41 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vrk1Q80X41 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Vrk1Q80X41 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vrk1Q80X41 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
Vrk1Q80X41 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.11■□□□□ 0.49
Vrk1Q80X41 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vrk1Q80X41 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vrk1Q80X41 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Vrk1Q80X41 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Vrk1Q80X41 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vrk1Q80X41 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vrk1Q80X41 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vrk1Q80X41 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
Vrk1Q80X41 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vrk1Q80X41 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vrk1Q80X41 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vrk1Q80X41 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Vrk1Q80X41 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vrk1Q80X41 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.1■□□□□ 0.49
Vrk1Q80X41 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vrk1Q80X41 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Vrk1Q80X41 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Vrk1Q80X41 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vrk1Q80X41 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vrk1Q80X41 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vrk1Q80X41 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vrk1Q80X41 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms