Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Sh3tc2Q80VA5 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Sh3tc2Q80VA5 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.75■□□□□ 0.91
Sh3tc2Q80VA5 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sh3tc2Q80VA5 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Sh3tc2Q80VA5 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.75■□□□□ 0.91
Sh3tc2Q80VA5 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Sh3tc2Q80VA5 Gm6211-202ENSMUST00000167849 925 ntBASIC20.75■□□□□ 0.91
Sh3tc2Q80VA5 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Sh3tc2Q80VA5 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.75■□□□□ 0.91
Sh3tc2Q80VA5 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.75■□□□□ 0.91
Sh3tc2Q80VA5 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sh3tc2Q80VA5 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sh3tc2Q80VA5 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Sh3tc2Q80VA5 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sh3tc2Q80VA5 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Sh3tc2Q80VA5 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sh3tc2Q80VA5 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sh3tc2Q80VA5 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Sh3tc2Q80VA5 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sh3tc2Q80VA5 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sh3tc2Q80VA5 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Sh3tc2Q80VA5 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sh3tc2Q80VA5 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sh3tc2Q80VA5 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.74■□□□□ 0.91
Sh3tc2Q80VA5 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
Sh3tc2Q80VA5 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Sh3tc2Q80VA5 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Sh3tc2Q80VA5 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Sh3tc2Q80VA5 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sh3tc2Q80VA5 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.73■□□□□ 0.91
Sh3tc2Q80VA5 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sh3tc2Q80VA5 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sh3tc2Q80VA5 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sh3tc2Q80VA5 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sh3tc2Q80VA5 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sh3tc2Q80VA5 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Sh3tc2Q80VA5 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sh3tc2Q80VA5 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.72■□□□□ 0.91
Sh3tc2Q80VA5 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Sh3tc2Q80VA5 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Sh3tc2Q80VA5 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.72■□□□□ 0.91
Sh3tc2Q80VA5 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sh3tc2Q80VA5 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Sh3tc2Q80VA5 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.72■□□□□ 0.91
Sh3tc2Q80VA5 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sh3tc2Q80VA5 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sh3tc2Q80VA5 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Sh3tc2Q80VA5 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.72■□□□□ 0.91
Sh3tc2Q80VA5 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Sh3tc2Q80VA5 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sh3tc2Q80VA5 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Sh3tc2Q80VA5 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sh3tc2Q80VA5 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sh3tc2Q80VA5 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sh3tc2Q80VA5 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Sh3tc2Q80VA5 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Sh3tc2Q80VA5 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sh3tc2Q80VA5 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sh3tc2Q80VA5 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Sh3tc2Q80VA5 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Sh3tc2Q80VA5 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sh3tc2Q80VA5 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Sh3tc2Q80VA5 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Sh3tc2Q80VA5 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.7■□□□□ 0.9
Sh3tc2Q80VA5 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.7■□□□□ 0.9
Sh3tc2Q80VA5 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sh3tc2Q80VA5 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sh3tc2Q80VA5 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sh3tc2Q80VA5 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Sh3tc2Q80VA5 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Sh3tc2Q80VA5 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.7■□□□□ 0.9
Sh3tc2Q80VA5 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sh3tc2Q80VA5 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Sh3tc2Q80VA5 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sh3tc2Q80VA5 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Sh3tc2Q80VA5 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sh3tc2Q80VA5 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Sh3tc2Q80VA5 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sh3tc2Q80VA5 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.69■□□□□ 0.9
Sh3tc2Q80VA5 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sh3tc2Q80VA5 Gm13534-201ENSMUST00000121169 513 ntBASIC20.69■□□□□ 0.9
Sh3tc2Q80VA5 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.69■□□□□ 0.9
Sh3tc2Q80VA5 Mir6982-201ENSMUST00000184354 68 ntBASIC20.69■□□□□ 0.9
Sh3tc2Q80VA5 Trmt13-210ENSMUST00000198454 880 ntBASIC20.69■□□□□ 0.9
Sh3tc2Q80VA5 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sh3tc2Q80VA5 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sh3tc2Q80VA5 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sh3tc2Q80VA5 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sh3tc2Q80VA5 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sh3tc2Q80VA5 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sh3tc2Q80VA5 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sh3tc2Q80VA5 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sh3tc2Q80VA5 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sh3tc2Q80VA5 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sh3tc2Q80VA5 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.68■□□□□ 0.9
Sh3tc2Q80VA5 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.68■□□□□ 0.9
Sh3tc2Q80VA5 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sh3tc2Q80VA5 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Sh3tc2Q80VA5 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms