Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim62Q80V85 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Trim62Q80V85 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trim62Q80V85 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim62Q80V85 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim62Q80V85 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim62Q80V85 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim62Q80V85 Gm42569-201ENSMUST00000200539 472 ntBASIC19.72■□□□□ 0.75
Trim62Q80V85 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.72■□□□□ 0.75
Trim62Q80V85 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trim62Q80V85 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim62Q80V85 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.72■□□□□ 0.75
Trim62Q80V85 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim62Q80V85 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim62Q80V85 Golph3-202ENSMUST00000226517 2359 ntBASIC19.71■□□□□ 0.75
Trim62Q80V85 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Trim62Q80V85 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim62Q80V85 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.71■□□□□ 0.75
Trim62Q80V85 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim62Q80V85 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim62Q80V85 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim62Q80V85 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim62Q80V85 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim62Q80V85 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Trim62Q80V85 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.71■□□□□ 0.75
Trim62Q80V85 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim62Q80V85 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim62Q80V85 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim62Q80V85 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim62Q80V85 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.7■□□□□ 0.74
Trim62Q80V85 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim62Q80V85 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.7■□□□□ 0.74
Trim62Q80V85 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trim62Q80V85 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.7■□□□□ 0.74
Trim62Q80V85 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim62Q80V85 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trim62Q80V85 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Trim62Q80V85 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim62Q80V85 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.69■□□□□ 0.74
Trim62Q80V85 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.69■□□□□ 0.74
Trim62Q80V85 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim62Q80V85 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim62Q80V85 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim62Q80V85 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim62Q80V85 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim62Q80V85 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Trim62Q80V85 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.68■□□□□ 0.74
Trim62Q80V85 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim62Q80V85 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Trim62Q80V85 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Trim62Q80V85 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Trim62Q80V85 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.68■□□□□ 0.74
Trim62Q80V85 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim62Q80V85 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim62Q80V85 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim62Q80V85 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim62Q80V85 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim62Q80V85 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Trim62Q80V85 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim62Q80V85 Gm13534-201ENSMUST00000121169 513 ntBASIC19.67■□□□□ 0.74
Trim62Q80V85 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim62Q80V85 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim62Q80V85 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Trim62Q80V85 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
Trim62Q80V85 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim62Q80V85 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim62Q80V85 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim62Q80V85 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Trim62Q80V85 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Trim62Q80V85 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim62Q80V85 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim62Q80V85 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim62Q80V85 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim62Q80V85 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim62Q80V85 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim62Q80V85 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim62Q80V85 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim62Q80V85 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.66■□□□□ 0.74
Trim62Q80V85 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim62Q80V85 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim62Q80V85 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim62Q80V85 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim62Q80V85 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim62Q80V85 Gm7514-201ENSMUST00000209475 934 ntBASIC19.65■□□□□ 0.74
Trim62Q80V85 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.65■□□□□ 0.74
Trim62Q80V85 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim62Q80V85 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Trim62Q80V85 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim62Q80V85 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim62Q80V85 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim62Q80V85 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim62Q80V85 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim62Q80V85 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trim62Q80V85 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Trim62Q80V85 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim62Q80V85 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim62Q80V85 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trim62Q80V85 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trim62Q80V85 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trim62Q80V85 Gm26571-201ENSMUST00000181399 666 ntBASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms