Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.84■□□□□ 0.77
Prpf38bQ80SY5 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prpf38bQ80SY5 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prpf38bQ80SY5 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Prpf38bQ80SY5 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prpf38bQ80SY5 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Prpf38bQ80SY5 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prpf38bQ80SY5 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prpf38bQ80SY5 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prpf38bQ80SY5 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Prpf38bQ80SY5 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Prpf38bQ80SY5 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Prpf38bQ80SY5 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Prpf38bQ80SY5 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Prpf38bQ80SY5 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Prpf38bQ80SY5 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Prpf38bQ80SY5 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Prpf38bQ80SY5 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Prpf38bQ80SY5 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.83■□□□□ 0.77
Prpf38bQ80SY5 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Prpf38bQ80SY5 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Prpf38bQ80SY5 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Prpf38bQ80SY5 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Prpf38bQ80SY5 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Prpf38bQ80SY5 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Prpf38bQ80SY5 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Prpf38bQ80SY5 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Prpf38bQ80SY5 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Prpf38bQ80SY5 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Prpf38bQ80SY5 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Prpf38bQ80SY5 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prpf38bQ80SY5 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Prpf38bQ80SY5 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Prpf38bQ80SY5 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
Prpf38bQ80SY5 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prpf38bQ80SY5 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prpf38bQ80SY5 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Prpf38bQ80SY5 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Prpf38bQ80SY5 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prpf38bQ80SY5 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prpf38bQ80SY5 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prpf38bQ80SY5 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prpf38bQ80SY5 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.81■□□□□ 0.76
Prpf38bQ80SY5 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.81■□□□□ 0.76
Prpf38bQ80SY5 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Prpf38bQ80SY5 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Prpf38bQ80SY5 Gm37856-201ENSMUST00000191634 999 ntBASIC19.81■□□□□ 0.76
Prpf38bQ80SY5 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Prpf38bQ80SY5 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prpf38bQ80SY5 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prpf38bQ80SY5 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prpf38bQ80SY5 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prpf38bQ80SY5 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Prpf38bQ80SY5 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prpf38bQ80SY5 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prpf38bQ80SY5 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.8■□□□□ 0.76
Prpf38bQ80SY5 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Prpf38bQ80SY5 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Prpf38bQ80SY5 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Prpf38bQ80SY5 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prpf38bQ80SY5 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prpf38bQ80SY5 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.8■□□□□ 0.76
Prpf38bQ80SY5 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf38bQ80SY5 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf38bQ80SY5 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf38bQ80SY5 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.79■□□□□ 0.76
Prpf38bQ80SY5 Gm13148-201ENSMUST00000118892 745 ntBASIC19.79■□□□□ 0.76
Prpf38bQ80SY5 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf38bQ80SY5 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf38bQ80SY5 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Prpf38bQ80SY5 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf38bQ80SY5 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Prpf38bQ80SY5 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf38bQ80SY5 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf38bQ80SY5 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf38bQ80SY5 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf38bQ80SY5 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf38bQ80SY5 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf38bQ80SY5 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.78■□□□□ 0.76
Prpf38bQ80SY5 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.78■□□□□ 0.76
Prpf38bQ80SY5 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf38bQ80SY5 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf38bQ80SY5 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf38bQ80SY5 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf38bQ80SY5 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf38bQ80SY5 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf38bQ80SY5 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Prpf38bQ80SY5 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Prpf38bQ80SY5 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
Prpf38bQ80SY5 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.77■□□□□ 0.76
Prpf38bQ80SY5 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.77■□□□□ 0.76
Prpf38bQ80SY5 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prpf38bQ80SY5 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Prpf38bQ80SY5 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.75
Prpf38bQ80SY5 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf38bQ80SY5 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
Prpf38bQ80SY5 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.76■□□□□ 0.75
Prpf38bQ80SY5 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.76■□□□□ 0.75
Prpf38bQ80SY5 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf38bQ80SY5 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms