Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh8Q7TSK3 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh8Q7TSK3 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Pcdh8Q7TSK3 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.78■□□□□ 0.6
Pcdh8Q7TSK3 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh8Q7TSK3 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh8Q7TSK3 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh8Q7TSK3 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.78■□□□□ 0.6
Pcdh8Q7TSK3 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Pcdh8Q7TSK3 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.78■□□□□ 0.6
Pcdh8Q7TSK3 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.78■□□□□ 0.6
Pcdh8Q7TSK3 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh8Q7TSK3 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh8Q7TSK3 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh8Q7TSK3 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh8Q7TSK3 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.77■□□□□ 0.6
Pcdh8Q7TSK3 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh8Q7TSK3 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh8Q7TSK3 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh8Q7TSK3 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh8Q7TSK3 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh8Q7TSK3 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh8Q7TSK3 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh8Q7TSK3 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Pcdh8Q7TSK3 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Pcdh8Q7TSK3 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh8Q7TSK3 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Pcdh8Q7TSK3 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh8Q7TSK3 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh8Q7TSK3 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdh8Q7TSK3 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
Pcdh8Q7TSK3 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdh8Q7TSK3 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh8Q7TSK3 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Pcdh8Q7TSK3 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh8Q7TSK3 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Pcdh8Q7TSK3 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh8Q7TSK3 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh8Q7TSK3 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh8Q7TSK3 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh8Q7TSK3 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh8Q7TSK3 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh8Q7TSK3 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh8Q7TSK3 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh8Q7TSK3 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Pcdh8Q7TSK3 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh8Q7TSK3 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.75■□□□□ 0.59
Pcdh8Q7TSK3 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh8Q7TSK3 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.75■□□□□ 0.59
Pcdh8Q7TSK3 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Pcdh8Q7TSK3 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh8Q7TSK3 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.75■□□□□ 0.59
Pcdh8Q7TSK3 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh8Q7TSK3 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh8Q7TSK3 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh8Q7TSK3 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Pcdh8Q7TSK3 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh8Q7TSK3 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh8Q7TSK3 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Pcdh8Q7TSK3 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh8Q7TSK3 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh8Q7TSK3 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh8Q7TSK3 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.74■□□□□ 0.59
Pcdh8Q7TSK3 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh8Q7TSK3 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.74■□□□□ 0.59
Pcdh8Q7TSK3 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh8Q7TSK3 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh8Q7TSK3 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh8Q7TSK3 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh8Q7TSK3 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh8Q7TSK3 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh8Q7TSK3 Gm13146-201ENSMUST00000118508 780 ntBASIC18.73■□□□□ 0.59
Pcdh8Q7TSK3 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Pcdh8Q7TSK3 Mir5133-201ENSMUST00000174955 77 ntBASIC18.73■□□□□ 0.59
Pcdh8Q7TSK3 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.73■□□□□ 0.59
Pcdh8Q7TSK3 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh8Q7TSK3 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.73■□□□□ 0.59
Pcdh8Q7TSK3 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.73■□□□□ 0.59
Pcdh8Q7TSK3 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh8Q7TSK3 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh8Q7TSK3 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh8Q7TSK3 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh8Q7TSK3 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Pcdh8Q7TSK3 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh8Q7TSK3 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh8Q7TSK3 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.72■□□□□ 0.59
Pcdh8Q7TSK3 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.72■□□□□ 0.59
Pcdh8Q7TSK3 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh8Q7TSK3 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh8Q7TSK3 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Pcdh8Q7TSK3 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Pcdh8Q7TSK3 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.72■□□□□ 0.59
Pcdh8Q7TSK3 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh8Q7TSK3 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh8Q7TSK3 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh8Q7TSK3 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh8Q7TSK3 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh8Q7TSK3 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh8Q7TSK3 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh8Q7TSK3 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms