Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Rif1Q6PR54 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rif1Q6PR54 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rif1Q6PR54 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rif1Q6PR54 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rif1Q6PR54 Gm25016-201ENSMUST00000158399 131 ntBASIC16.12■□□□□ 0.17
Rif1Q6PR54 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rif1Q6PR54 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rif1Q6PR54 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
Rif1Q6PR54 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rif1Q6PR54 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Rif1Q6PR54 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rif1Q6PR54 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rif1Q6PR54 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rif1Q6PR54 Gm44549-201ENSMUST00000208351 577 ntBASIC16.11■□□□□ 0.17
Rif1Q6PR54 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.11■□□□□ 0.17
Rif1Q6PR54 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rif1Q6PR54 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rif1Q6PR54 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rif1Q6PR54 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rif1Q6PR54 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rif1Q6PR54 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rif1Q6PR54 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rif1Q6PR54 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rif1Q6PR54 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Rif1Q6PR54 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rif1Q6PR54 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rif1Q6PR54 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rif1Q6PR54 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rif1Q6PR54 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rif1Q6PR54 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rif1Q6PR54 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rif1Q6PR54 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rif1Q6PR54 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Rif1Q6PR54 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rif1Q6PR54 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rif1Q6PR54 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Rif1Q6PR54 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Rif1Q6PR54 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Rif1Q6PR54 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.08■□□□□ 0.17
Rif1Q6PR54 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.08■□□□□ 0.17
Rif1Q6PR54 Gm18032-201ENSMUST00000222541 538 ntBASIC16.08■□□□□ 0.17
Rif1Q6PR54 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rif1Q6PR54 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rif1Q6PR54 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rif1Q6PR54 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rif1Q6PR54 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rif1Q6PR54 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rif1Q6PR54 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rif1Q6PR54 Mzt1-203ENSMUST00000227948 952 ntBASIC16.08■□□□□ 0.16
Rif1Q6PR54 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rif1Q6PR54 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rif1Q6PR54 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rif1Q6PR54 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.07■□□□□ 0.16
Rif1Q6PR54 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Rif1Q6PR54 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rif1Q6PR54 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rif1Q6PR54 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.07■□□□□ 0.16
Rif1Q6PR54 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.07■□□□□ 0.16
Rif1Q6PR54 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rif1Q6PR54 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rif1Q6PR54 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rif1Q6PR54 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC16.07■□□□□ 0.16
Rif1Q6PR54 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rif1Q6PR54 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rif1Q6PR54 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.07■□□□□ 0.16
Rif1Q6PR54 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.07■□□□□ 0.16
Rif1Q6PR54 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rif1Q6PR54 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rif1Q6PR54 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rif1Q6PR54 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rif1Q6PR54 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Rif1Q6PR54 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.06■□□□□ 0.16
Rif1Q6PR54 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.06■□□□□ 0.16
Rif1Q6PR54 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rif1Q6PR54 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rif1Q6PR54 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.06■□□□□ 0.16
Rif1Q6PR54 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rif1Q6PR54 Gm17661-201ENSMUST00000170317 270 ntBASIC16.06■□□□□ 0.16
Rif1Q6PR54 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.06■□□□□ 0.16
Rif1Q6PR54 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rif1Q6PR54 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rif1Q6PR54 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rif1Q6PR54 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rif1Q6PR54 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rif1Q6PR54 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Rif1Q6PR54 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rif1Q6PR54 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rif1Q6PR54 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Rif1Q6PR54 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Rif1Q6PR54 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.05■□□□□ 0.16
Rif1Q6PR54 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.05■□□□□ 0.16
Rif1Q6PR54 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rif1Q6PR54 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rif1Q6PR54 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.05■□□□□ 0.16
Rif1Q6PR54 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.05■□□□□ 0.16
Rif1Q6PR54 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rif1Q6PR54 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.04■□□□□ 0.16
Rif1Q6PR54 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Rif1Q6PR54 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 102.9 ms