Protein–RNA interactions for Protein: Q6PGE7

Slc6a7, Sodium-dependent proline transporter, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a7Q6PGE7 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc6a7Q6PGE7 Gm18284-201ENSMUST00000172604 624 ntBASIC17.31■□□□□ 0.36
Slc6a7Q6PGE7 Gm43017-201ENSMUST00000198296 752 ntBASIC17.31■□□□□ 0.36
Slc6a7Q6PGE7 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.31■□□□□ 0.36
Slc6a7Q6PGE7 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.31■□□□□ 0.36
Slc6a7Q6PGE7 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.31■□□□□ 0.36
Slc6a7Q6PGE7 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc6a7Q6PGE7 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Slc6a7Q6PGE7 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a7Q6PGE7 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a7Q6PGE7 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Slc6a7Q6PGE7 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a7Q6PGE7 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a7Q6PGE7 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Slc6a7Q6PGE7 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a7Q6PGE7 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Slc6a7Q6PGE7 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a7Q6PGE7 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a7Q6PGE7 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.3■□□□□ 0.36
Slc6a7Q6PGE7 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a7Q6PGE7 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Slc6a7Q6PGE7 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a7Q6PGE7 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a7Q6PGE7 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Slc6a7Q6PGE7 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a7Q6PGE7 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.3■□□□□ 0.36
Slc6a7Q6PGE7 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a7Q6PGE7 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.29■□□□□ 0.36
Slc6a7Q6PGE7 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a7Q6PGE7 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Slc6a7Q6PGE7 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.29■□□□□ 0.36
Slc6a7Q6PGE7 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Slc6a7Q6PGE7 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.29■□□□□ 0.36
Slc6a7Q6PGE7 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a7Q6PGE7 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Slc6a7Q6PGE7 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a7Q6PGE7 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a7Q6PGE7 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a7Q6PGE7 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a7Q6PGE7 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Slc6a7Q6PGE7 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a7Q6PGE7 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a7Q6PGE7 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Slc6a7Q6PGE7 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a7Q6PGE7 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a7Q6PGE7 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.28■□□□□ 0.36
Slc6a7Q6PGE7 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a7Q6PGE7 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a7Q6PGE7 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Slc6a7Q6PGE7 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a7Q6PGE7 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a7Q6PGE7 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a7Q6PGE7 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a7Q6PGE7 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a7Q6PGE7 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a7Q6PGE7 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a7Q6PGE7 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a7Q6PGE7 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a7Q6PGE7 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a7Q6PGE7 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a7Q6PGE7 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a7Q6PGE7 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a7Q6PGE7 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a7Q6PGE7 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc6a7Q6PGE7 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc6a7Q6PGE7 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc6a7Q6PGE7 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc6a7Q6PGE7 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc6a7Q6PGE7 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Slc6a7Q6PGE7 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Slc6a7Q6PGE7 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc6a7Q6PGE7 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Slc6a7Q6PGE7 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.27■□□□□ 0.36
Slc6a7Q6PGE7 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Slc6a7Q6PGE7 Gm43530-201ENSMUST00000195920 274 ntBASIC17.27■□□□□ 0.36
Slc6a7Q6PGE7 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Slc6a7Q6PGE7 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.27■□□□□ 0.35
Slc6a7Q6PGE7 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slc6a7Q6PGE7 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slc6a7Q6PGE7 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slc6a7Q6PGE7 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Slc6a7Q6PGE7 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slc6a7Q6PGE7 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a7Q6PGE7 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a7Q6PGE7 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Slc6a7Q6PGE7 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a7Q6PGE7 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a7Q6PGE7 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a7Q6PGE7 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a7Q6PGE7 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a7Q6PGE7 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Slc6a7Q6PGE7 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Slc6a7Q6PGE7 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.25■□□□□ 0.35
Slc6a7Q6PGE7 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc6a7Q6PGE7 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc6a7Q6PGE7 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Slc6a7Q6PGE7 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Slc6a7Q6PGE7 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc6a7Q6PGE7 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Slc6a7Q6PGE7 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms