Protein–RNA interactions for Protein: Q6PFY8

Trim45, Tripartite motif-containing protein 45, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim45Q6PFY8 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim45Q6PFY8 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim45Q6PFY8 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.97■□□□□ 0.47
Trim45Q6PFY8 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim45Q6PFY8 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.97■□□□□ 0.47
Trim45Q6PFY8 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.97■□□□□ 0.47
Trim45Q6PFY8 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim45Q6PFY8 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim45Q6PFY8 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.97■□□□□ 0.47
Trim45Q6PFY8 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
Trim45Q6PFY8 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim45Q6PFY8 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Trim45Q6PFY8 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim45Q6PFY8 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim45Q6PFY8 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Trim45Q6PFY8 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim45Q6PFY8 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim45Q6PFY8 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim45Q6PFY8 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Trim45Q6PFY8 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim45Q6PFY8 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim45Q6PFY8 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim45Q6PFY8 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.96■□□□□ 0.47
Trim45Q6PFY8 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Trim45Q6PFY8 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim45Q6PFY8 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim45Q6PFY8 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.96■□□□□ 0.47
Trim45Q6PFY8 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim45Q6PFY8 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim45Q6PFY8 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
Trim45Q6PFY8 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim45Q6PFY8 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.96■□□□□ 0.47
Trim45Q6PFY8 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim45Q6PFY8 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trim45Q6PFY8 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trim45Q6PFY8 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim45Q6PFY8 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim45Q6PFY8 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim45Q6PFY8 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Trim45Q6PFY8 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trim45Q6PFY8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Trim45Q6PFY8 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trim45Q6PFY8 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim45Q6PFY8 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim45Q6PFY8 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim45Q6PFY8 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.95■□□□□ 0.46
Trim45Q6PFY8 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim45Q6PFY8 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim45Q6PFY8 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim45Q6PFY8 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim45Q6PFY8 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim45Q6PFY8 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.94■□□□□ 0.46
Trim45Q6PFY8 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Trim45Q6PFY8 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Trim45Q6PFY8 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.94■□□□□ 0.46
Trim45Q6PFY8 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.94■□□□□ 0.46
Trim45Q6PFY8 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.94■□□□□ 0.46
Trim45Q6PFY8 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.94■□□□□ 0.46
Trim45Q6PFY8 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim45Q6PFY8 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.94■□□□□ 0.46
Trim45Q6PFY8 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim45Q6PFY8 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim45Q6PFY8 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim45Q6PFY8 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.93■□□□□ 0.46
Trim45Q6PFY8 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim45Q6PFY8 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim45Q6PFY8 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim45Q6PFY8 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim45Q6PFY8 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Trim45Q6PFY8 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim45Q6PFY8 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim45Q6PFY8 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim45Q6PFY8 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim45Q6PFY8 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim45Q6PFY8 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim45Q6PFY8 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim45Q6PFY8 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim45Q6PFY8 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim45Q6PFY8 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim45Q6PFY8 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim45Q6PFY8 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.92■□□□□ 0.46
Trim45Q6PFY8 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim45Q6PFY8 Gm10849-201ENSMUST00000100397 618 ntBASIC17.92■□□□□ 0.46
Trim45Q6PFY8 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.92■□□□□ 0.46
Trim45Q6PFY8 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Trim45Q6PFY8 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trim45Q6PFY8 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim45Q6PFY8 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim45Q6PFY8 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim45Q6PFY8 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim45Q6PFY8 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim45Q6PFY8 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim45Q6PFY8 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trim45Q6PFY8 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
Trim45Q6PFY8 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim45Q6PFY8 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim45Q6PFY8 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim45Q6PFY8 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim45Q6PFY8 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim45Q6PFY8 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms