Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Snrnp40Q6PE01 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Snrnp40Q6PE01 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
Snrnp40Q6PE01 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Snrnp40Q6PE01 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Snrnp40Q6PE01 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Snrnp40Q6PE01 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Snrnp40Q6PE01 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Snrnp40Q6PE01 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Snrnp40Q6PE01 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Snrnp40Q6PE01 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.83■□□□□ 0.28
Snrnp40Q6PE01 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Snrnp40Q6PE01 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.83■□□□□ 0.28
Snrnp40Q6PE01 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Snrnp40Q6PE01 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC16.83■□□□□ 0.28
Snrnp40Q6PE01 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.83■□□□□ 0.28
Snrnp40Q6PE01 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Snrnp40Q6PE01 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Snrnp40Q6PE01 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.82■□□□□ 0.28
Snrnp40Q6PE01 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.82■□□□□ 0.28
Snrnp40Q6PE01 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Snrnp40Q6PE01 Gm715-201ENSMUST00000117865 831 ntBASIC16.82■□□□□ 0.28
Snrnp40Q6PE01 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Snrnp40Q6PE01 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.82■□□□□ 0.28
Snrnp40Q6PE01 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.82■□□□□ 0.28
Snrnp40Q6PE01 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.82■□□□□ 0.28
Snrnp40Q6PE01 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Snrnp40Q6PE01 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Snrnp40Q6PE01 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Snrnp40Q6PE01 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Snrnp40Q6PE01 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.82■□□□□ 0.28
Snrnp40Q6PE01 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Snrnp40Q6PE01 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Snrnp40Q6PE01 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Snrnp40Q6PE01 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Snrnp40Q6PE01 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Snrnp40Q6PE01 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Snrnp40Q6PE01 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Snrnp40Q6PE01 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.81■□□□□ 0.28
Snrnp40Q6PE01 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.81■□□□□ 0.28
Snrnp40Q6PE01 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.81■□□□□ 0.28
Snrnp40Q6PE01 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.81■□□□□ 0.28
Snrnp40Q6PE01 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Snrnp40Q6PE01 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Snrnp40Q6PE01 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Snrnp40Q6PE01 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Snrnp40Q6PE01 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Snrnp40Q6PE01 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Snrnp40Q6PE01 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Snrnp40Q6PE01 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Snrnp40Q6PE01 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Snrnp40Q6PE01 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC16.8■□□□□ 0.28
Snrnp40Q6PE01 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Snrnp40Q6PE01 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Snrnp40Q6PE01 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Snrnp40Q6PE01 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC16.8■□□□□ 0.28
Snrnp40Q6PE01 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Snrnp40Q6PE01 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Snrnp40Q6PE01 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.8■□□□□ 0.28
Snrnp40Q6PE01 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Snrnp40Q6PE01 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.8■□□□□ 0.28
Snrnp40Q6PE01 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Snrnp40Q6PE01 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.8■□□□□ 0.28
Snrnp40Q6PE01 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Snrnp40Q6PE01 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Snrnp40Q6PE01 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Snrnp40Q6PE01 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Snrnp40Q6PE01 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Snrnp40Q6PE01 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Snrnp40Q6PE01 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Snrnp40Q6PE01 Gm18666-201ENSMUST00000190039 958 ntBASIC16.79■□□□□ 0.28
Snrnp40Q6PE01 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Snrnp40Q6PE01 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.79■□□□□ 0.28
Snrnp40Q6PE01 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Snrnp40Q6PE01 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Snrnp40Q6PE01 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Snrnp40Q6PE01 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Snrnp40Q6PE01 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Snrnp40Q6PE01 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Snrnp40Q6PE01 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.78■□□□□ 0.28
Snrnp40Q6PE01 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.78■□□□□ 0.28
Snrnp40Q6PE01 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Snrnp40Q6PE01 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Snrnp40Q6PE01 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Snrnp40Q6PE01 Gm11249-201ENSMUST00000117071 859 ntBASIC16.78■□□□□ 0.28
Snrnp40Q6PE01 Gm44549-201ENSMUST00000208351 577 ntBASIC16.78■□□□□ 0.28
Snrnp40Q6PE01 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.78■□□□□ 0.28
Snrnp40Q6PE01 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Snrnp40Q6PE01 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.78■□□□□ 0.28
Snrnp40Q6PE01 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Snrnp40Q6PE01 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Snrnp40Q6PE01 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Snrnp40Q6PE01 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Snrnp40Q6PE01 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Snrnp40Q6PE01 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.78■□□□□ 0.28
Snrnp40Q6PE01 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Snrnp40Q6PE01 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.77■□□□□ 0.28
Snrnp40Q6PE01 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Snrnp40Q6PE01 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.77■□□□□ 0.28
Snrnp40Q6PE01 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms