Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf220Q6PDX6 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf220Q6PDX6 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf220Q6PDX6 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf220Q6PDX6 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf220Q6PDX6 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf220Q6PDX6 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf220Q6PDX6 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf220Q6PDX6 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf220Q6PDX6 BC021767-201ENSMUST00000126387 1716 ntBASIC17.98■□□□□ 0.47
Rnf220Q6PDX6 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf220Q6PDX6 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf220Q6PDX6 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.98■□□□□ 0.47
Rnf220Q6PDX6 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf220Q6PDX6 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf220Q6PDX6 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.98■□□□□ 0.47
Rnf220Q6PDX6 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf220Q6PDX6 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf220Q6PDX6 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf220Q6PDX6 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf220Q6PDX6 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf220Q6PDX6 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf220Q6PDX6 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf220Q6PDX6 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf220Q6PDX6 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Rnf220Q6PDX6 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf220Q6PDX6 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.97■□□□□ 0.47
Rnf220Q6PDX6 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.97■□□□□ 0.47
Rnf220Q6PDX6 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf220Q6PDX6 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.97■□□□□ 0.47
Rnf220Q6PDX6 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf220Q6PDX6 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf220Q6PDX6 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf220Q6PDX6 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf220Q6PDX6 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf220Q6PDX6 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Rnf220Q6PDX6 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf220Q6PDX6 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf220Q6PDX6 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf220Q6PDX6 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf220Q6PDX6 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf220Q6PDX6 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf220Q6PDX6 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Rnf220Q6PDX6 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Rnf220Q6PDX6 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf220Q6PDX6 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Rnf220Q6PDX6 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf220Q6PDX6 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf220Q6PDX6 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Rnf220Q6PDX6 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Rnf220Q6PDX6 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Rnf220Q6PDX6 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf220Q6PDX6 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf220Q6PDX6 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
Rnf220Q6PDX6 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf220Q6PDX6 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf220Q6PDX6 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf220Q6PDX6 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf220Q6PDX6 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf220Q6PDX6 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Rnf220Q6PDX6 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.95■□□□□ 0.46
Rnf220Q6PDX6 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.94■□□□□ 0.46
Rnf220Q6PDX6 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Rnf220Q6PDX6 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf220Q6PDX6 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
Rnf220Q6PDX6 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf220Q6PDX6 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf220Q6PDX6 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.94■□□□□ 0.46
Rnf220Q6PDX6 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf220Q6PDX6 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf220Q6PDX6 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf220Q6PDX6 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf220Q6PDX6 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf220Q6PDX6 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf220Q6PDX6 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.94■□□□□ 0.46
Rnf220Q6PDX6 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
Rnf220Q6PDX6 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf220Q6PDX6 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf220Q6PDX6 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.93■□□□□ 0.46
Rnf220Q6PDX6 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf220Q6PDX6 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf220Q6PDX6 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
Rnf220Q6PDX6 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf220Q6PDX6 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf220Q6PDX6 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.93■□□□□ 0.46
Rnf220Q6PDX6 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf220Q6PDX6 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf220Q6PDX6 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf220Q6PDX6 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf220Q6PDX6 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf220Q6PDX6 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf220Q6PDX6 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf220Q6PDX6 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf220Q6PDX6 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf220Q6PDX6 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Rnf220Q6PDX6 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf220Q6PDX6 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf220Q6PDX6 Gm10232-201ENSMUST00000089221 720 ntBASIC17.92■□□□□ 0.46
Rnf220Q6PDX6 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf220Q6PDX6 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms