Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Smarcd3Q6P9Z1 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcd3Q6P9Z1 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcd3Q6P9Z1 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcd3Q6P9Z1 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcd3Q6P9Z1 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcd3Q6P9Z1 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcd3Q6P9Z1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.42■□□□□ 0.38
Smarcd3Q6P9Z1 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcd3Q6P9Z1 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcd3Q6P9Z1 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcd3Q6P9Z1 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcd3Q6P9Z1 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Smarcd3Q6P9Z1 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Smarcd3Q6P9Z1 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcd3Q6P9Z1 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcd3Q6P9Z1 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.42■□□□□ 0.38
Smarcd3Q6P9Z1 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.41■□□□□ 0.38
Smarcd3Q6P9Z1 Gm12922-201ENSMUST00000120626 809 ntBASIC17.41■□□□□ 0.38
Smarcd3Q6P9Z1 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.41■□□□□ 0.38
Smarcd3Q6P9Z1 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcd3Q6P9Z1 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Smarcd3Q6P9Z1 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcd3Q6P9Z1 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcd3Q6P9Z1 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcd3Q6P9Z1 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcd3Q6P9Z1 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Smarcd3Q6P9Z1 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcd3Q6P9Z1 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcd3Q6P9Z1 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcd3Q6P9Z1 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Smarcd3Q6P9Z1 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcd3Q6P9Z1 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.4■□□□□ 0.38
Smarcd3Q6P9Z1 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcd3Q6P9Z1 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcd3Q6P9Z1 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcd3Q6P9Z1 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Smarcd3Q6P9Z1 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.4■□□□□ 0.38
Smarcd3Q6P9Z1 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcd3Q6P9Z1 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcd3Q6P9Z1 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcd3Q6P9Z1 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.4■□□□□ 0.38
Smarcd3Q6P9Z1 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Smarcd3Q6P9Z1 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Smarcd3Q6P9Z1 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcd3Q6P9Z1 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.39■□□□□ 0.37
Smarcd3Q6P9Z1 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcd3Q6P9Z1 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcd3Q6P9Z1 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcd3Q6P9Z1 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcd3Q6P9Z1 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.39■□□□□ 0.37
Smarcd3Q6P9Z1 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcd3Q6P9Z1 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcd3Q6P9Z1 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcd3Q6P9Z1 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcd3Q6P9Z1 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.38■□□□□ 0.37
Smarcd3Q6P9Z1 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.38■□□□□ 0.37
Smarcd3Q6P9Z1 Serp2-204ENSMUST00000228055 705 ntBASIC17.38■□□□□ 0.37
Smarcd3Q6P9Z1 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcd3Q6P9Z1 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcd3Q6P9Z1 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcd3Q6P9Z1 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Smarcd3Q6P9Z1 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcd3Q6P9Z1 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcd3Q6P9Z1 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcd3Q6P9Z1 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcd3Q6P9Z1 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcd3Q6P9Z1 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcd3Q6P9Z1 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcd3Q6P9Z1 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcd3Q6P9Z1 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcd3Q6P9Z1 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcd3Q6P9Z1 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcd3Q6P9Z1 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Smarcd3Q6P9Z1 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcd3Q6P9Z1 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.37■□□□□ 0.37
Smarcd3Q6P9Z1 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcd3Q6P9Z1 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Smarcd3Q6P9Z1 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Smarcd3Q6P9Z1 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcd3Q6P9Z1 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcd3Q6P9Z1 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.36■□□□□ 0.37
Smarcd3Q6P9Z1 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.36■□□□□ 0.37
Smarcd3Q6P9Z1 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcd3Q6P9Z1 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcd3Q6P9Z1 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcd3Q6P9Z1 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Smarcd3Q6P9Z1 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcd3Q6P9Z1 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcd3Q6P9Z1 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.36■□□□□ 0.37
Smarcd3Q6P9Z1 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcd3Q6P9Z1 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcd3Q6P9Z1 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Smarcd3Q6P9Z1 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcd3Q6P9Z1 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcd3Q6P9Z1 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcd3Q6P9Z1 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.35■□□□□ 0.37
Smarcd3Q6P9Z1 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.35■□□□□ 0.37
Smarcd3Q6P9Z1 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.35■□□□□ 0.37
Smarcd3Q6P9Z1 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms