Protein–RNA interactions for Protein: Q6P9K8

Caskin1, Caskin-1, mousemouse

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Caskin1Q6P9K8 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Caskin1Q6P9K8 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC28.26■■■□□ 2.12
Caskin1Q6P9K8 Gm18666-201ENSMUST00000190039 958 ntBASIC28.26■■■□□ 2.12
Caskin1Q6P9K8 AC158538.1-201ENSMUST00000225870 294 ntBASIC28.26■■■□□ 2.12
Caskin1Q6P9K8 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
Caskin1Q6P9K8 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC28.26■■■□□ 2.12
Caskin1Q6P9K8 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Caskin1Q6P9K8 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Caskin1Q6P9K8 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC28.26■■■□□ 2.11
Caskin1Q6P9K8 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC28.26■■■□□ 2.11
Caskin1Q6P9K8 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Caskin1Q6P9K8 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC28.25■■■□□ 2.11
Caskin1Q6P9K8 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Caskin1Q6P9K8 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
Caskin1Q6P9K8 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Caskin1Q6P9K8 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
Caskin1Q6P9K8 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Caskin1Q6P9K8 Gm2399-201ENSMUST00000104944 225 ntBASIC28.25■■■□□ 2.11
Caskin1Q6P9K8 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Caskin1Q6P9K8 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
Caskin1Q6P9K8 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC28.24■■■□□ 2.11
Caskin1Q6P9K8 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC28.24■■■□□ 2.11
Caskin1Q6P9K8 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC28.24■■■□□ 2.11
Caskin1Q6P9K8 Gm6576-201ENSMUST00000169678 883 ntBASIC28.24■■■□□ 2.11
Caskin1Q6P9K8 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Caskin1Q6P9K8 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Caskin1Q6P9K8 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC28.24■■■□□ 2.11
Caskin1Q6P9K8 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Caskin1Q6P9K8 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
Caskin1Q6P9K8 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
Caskin1Q6P9K8 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC28.23■■■□□ 2.11
Caskin1Q6P9K8 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC28.23■■■□□ 2.11
Caskin1Q6P9K8 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Caskin1Q6P9K8 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Caskin1Q6P9K8 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC28.22■■■□□ 2.11
Caskin1Q6P9K8 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Caskin1Q6P9K8 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Caskin1Q6P9K8 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Caskin1Q6P9K8 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
Caskin1Q6P9K8 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC28.22■■■□□ 2.11
Caskin1Q6P9K8 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC28.22■■■□□ 2.11
Caskin1Q6P9K8 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC28.22■■■□□ 2.11
Caskin1Q6P9K8 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Caskin1Q6P9K8 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Caskin1Q6P9K8 Gm715-201ENSMUST00000117865 831 ntBASIC28.21■■■□□ 2.11
Caskin1Q6P9K8 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Caskin1Q6P9K8 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Caskin1Q6P9K8 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Caskin1Q6P9K8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Caskin1Q6P9K8 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Caskin1Q6P9K8 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC28.2■■■□□ 2.11
Caskin1Q6P9K8 AC140264.2-202ENSMUST00000218746 817 ntBASIC28.2■■■□□ 2.11
Caskin1Q6P9K8 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Caskin1Q6P9K8 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.1
Caskin1Q6P9K8 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Caskin1Q6P9K8 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.1
Caskin1Q6P9K8 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Caskin1Q6P9K8 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC28.19■■■□□ 2.1
Caskin1Q6P9K8 AC153881.1-201ENSMUST00000214448 284 ntBASIC28.19■■■□□ 2.1
Caskin1Q6P9K8 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
Caskin1Q6P9K8 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
Caskin1Q6P9K8 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Caskin1Q6P9K8 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
Caskin1Q6P9K8 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Caskin1Q6P9K8 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
Caskin1Q6P9K8 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Caskin1Q6P9K8 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
Caskin1Q6P9K8 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC28.18■■■□□ 2.1
Caskin1Q6P9K8 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
Caskin1Q6P9K8 Gm43006-201ENSMUST00000197702 1602 ntBASIC28.18■■■□□ 2.1
Caskin1Q6P9K8 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
Caskin1Q6P9K8 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Caskin1Q6P9K8 Gm22325-201ENSMUST00000158904 308 ntBASIC28.18■■■□□ 2.1
Caskin1Q6P9K8 Arhgef33-211ENSMUST00000225658 473 ntBASIC28.18■■■□□ 2.1
Caskin1Q6P9K8 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
Caskin1Q6P9K8 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Caskin1Q6P9K8 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Caskin1Q6P9K8 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Caskin1Q6P9K8 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Caskin1Q6P9K8 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Caskin1Q6P9K8 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC28.17■■■□□ 2.1
Caskin1Q6P9K8 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
Caskin1Q6P9K8 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Caskin1Q6P9K8 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Caskin1Q6P9K8 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Caskin1Q6P9K8 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Caskin1Q6P9K8 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC28.16■■■□□ 2.1
Caskin1Q6P9K8 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Caskin1Q6P9K8 AC163280.1-201ENSMUST00000228194 1100 ntBASIC28.16■■■□□ 2.1
Caskin1Q6P9K8 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Caskin1Q6P9K8 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Caskin1Q6P9K8 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Caskin1Q6P9K8 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC28.15■■■□□ 2.1
Caskin1Q6P9K8 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC28.15■■■□□ 2.1
Caskin1Q6P9K8 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Caskin1Q6P9K8 Gm7977-201ENSMUST00000193787 748 ntBASIC28.15■■■□□ 2.1
Caskin1Q6P9K8 AC154649.1-201ENSMUST00000227392 384 ntBASIC28.15■■■□□ 2.1
Caskin1Q6P9K8 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC28.15■■■□□ 2.1
Caskin1Q6P9K8 Nrn1-203ENSMUST00000223611 1443 ntBASIC28.15■■■□□ 2.1
Caskin1Q6P9K8 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC28.14■■■□□ 2.1
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms