Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Abcf1Q6P542 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Abcf1Q6P542 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Abcf1Q6P542 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
Abcf1Q6P542 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Abcf1Q6P542 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Abcf1Q6P542 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Abcf1Q6P542 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.24■□□□□ 0.99
Abcf1Q6P542 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.24■□□□□ 0.99
Abcf1Q6P542 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Abcf1Q6P542 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC21.24■□□□□ 0.99
Abcf1Q6P542 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Abcf1Q6P542 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Abcf1Q6P542 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.24■□□□□ 0.99
Abcf1Q6P542 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Abcf1Q6P542 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Abcf1Q6P542 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Abcf1Q6P542 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Abcf1Q6P542 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Abcf1Q6P542 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Abcf1Q6P542 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Abcf1Q6P542 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.23■□□□□ 0.99
Abcf1Q6P542 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.23■□□□□ 0.99
Abcf1Q6P542 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Abcf1Q6P542 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Abcf1Q6P542 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
Abcf1Q6P542 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Abcf1Q6P542 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
Abcf1Q6P542 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Abcf1Q6P542 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Abcf1Q6P542 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Abcf1Q6P542 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Abcf1Q6P542 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Abcf1Q6P542 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Abcf1Q6P542 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.22■□□□□ 0.99
Abcf1Q6P542 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Abcf1Q6P542 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Abcf1Q6P542 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Abcf1Q6P542 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Abcf1Q6P542 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Abcf1Q6P542 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC21.22■□□□□ 0.99
Abcf1Q6P542 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Abcf1Q6P542 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Abcf1Q6P542 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Abcf1Q6P542 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Abcf1Q6P542 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Abcf1Q6P542 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Abcf1Q6P542 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Abcf1Q6P542 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Abcf1Q6P542 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
Abcf1Q6P542 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Abcf1Q6P542 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Abcf1Q6P542 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Abcf1Q6P542 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Abcf1Q6P542 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Abcf1Q6P542 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Abcf1Q6P542 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Abcf1Q6P542 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Abcf1Q6P542 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.99
Abcf1Q6P542 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC21.2■□□□□ 0.98
Abcf1Q6P542 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Abcf1Q6P542 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC21.2■□□□□ 0.98
Abcf1Q6P542 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Abcf1Q6P542 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.2■□□□□ 0.98
Abcf1Q6P542 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
Abcf1Q6P542 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Abcf1Q6P542 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Abcf1Q6P542 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Abcf1Q6P542 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Abcf1Q6P542 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Abcf1Q6P542 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Abcf1Q6P542 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Abcf1Q6P542 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Abcf1Q6P542 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Abcf1Q6P542 Rncr4-201ENSMUST00000194541 2234 ntBASIC21.19■□□□□ 0.98
Abcf1Q6P542 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Abcf1Q6P542 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC21.19■□□□□ 0.98
Abcf1Q6P542 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Abcf1Q6P542 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
Abcf1Q6P542 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
Abcf1Q6P542 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
Abcf1Q6P542 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Abcf1Q6P542 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Abcf1Q6P542 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Abcf1Q6P542 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Abcf1Q6P542 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Abcf1Q6P542 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.18■□□□□ 0.98
Abcf1Q6P542 Mir7075-201ENSMUST00000184187 82 ntBASIC21.18■□□□□ 0.98
Abcf1Q6P542 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.18■□□□□ 0.98
Abcf1Q6P542 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Abcf1Q6P542 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Abcf1Q6P542 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Abcf1Q6P542 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Abcf1Q6P542 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Abcf1Q6P542 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
Abcf1Q6P542 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Abcf1Q6P542 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Abcf1Q6P542 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Abcf1Q6P542 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.17■□□□□ 0.98
Abcf1Q6P542 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms