Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sp140Q6NSQ5 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.33■□□□□ 0.68
Sp140Q6NSQ5 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Sp140Q6NSQ5 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sp140Q6NSQ5 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sp140Q6NSQ5 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sp140Q6NSQ5 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sp140Q6NSQ5 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.32■□□□□ 0.68
Sp140Q6NSQ5 Gm43017-201ENSMUST00000198296 752 ntBASIC19.32■□□□□ 0.68
Sp140Q6NSQ5 Gm40848-201ENSMUST00000221998 324 ntBASIC19.32■□□□□ 0.68
Sp140Q6NSQ5 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sp140Q6NSQ5 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sp140Q6NSQ5 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sp140Q6NSQ5 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sp140Q6NSQ5 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sp140Q6NSQ5 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sp140Q6NSQ5 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Sp140Q6NSQ5 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sp140Q6NSQ5 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sp140Q6NSQ5 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.31■□□□□ 0.68
Sp140Q6NSQ5 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.31■□□□□ 0.68
Sp140Q6NSQ5 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.31■□□□□ 0.68
Sp140Q6NSQ5 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sp140Q6NSQ5 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sp140Q6NSQ5 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sp140Q6NSQ5 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sp140Q6NSQ5 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sp140Q6NSQ5 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sp140Q6NSQ5 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sp140Q6NSQ5 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Sp140Q6NSQ5 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Sp140Q6NSQ5 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sp140Q6NSQ5 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sp140Q6NSQ5 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sp140Q6NSQ5 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.3■□□□□ 0.68
Sp140Q6NSQ5 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Sp140Q6NSQ5 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.3■□□□□ 0.68
Sp140Q6NSQ5 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sp140Q6NSQ5 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sp140Q6NSQ5 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sp140Q6NSQ5 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sp140Q6NSQ5 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sp140Q6NSQ5 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sp140Q6NSQ5 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sp140Q6NSQ5 BC021767-201ENSMUST00000126387 1716 ntBASIC19.29■□□□□ 0.68
Sp140Q6NSQ5 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sp140Q6NSQ5 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sp140Q6NSQ5 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sp140Q6NSQ5 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.29■□□□□ 0.68
Sp140Q6NSQ5 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Sp140Q6NSQ5 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sp140Q6NSQ5 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sp140Q6NSQ5 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.29■□□□□ 0.68
Sp140Q6NSQ5 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sp140Q6NSQ5 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sp140Q6NSQ5 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sp140Q6NSQ5 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sp140Q6NSQ5 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Sp140Q6NSQ5 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sp140Q6NSQ5 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Sp140Q6NSQ5 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sp140Q6NSQ5 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sp140Q6NSQ5 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Sp140Q6NSQ5 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sp140Q6NSQ5 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sp140Q6NSQ5 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sp140Q6NSQ5 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Sp140Q6NSQ5 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sp140Q6NSQ5 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Sp140Q6NSQ5 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sp140Q6NSQ5 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Sp140Q6NSQ5 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sp140Q6NSQ5 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sp140Q6NSQ5 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sp140Q6NSQ5 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Sp140Q6NSQ5 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sp140Q6NSQ5 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sp140Q6NSQ5 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sp140Q6NSQ5 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Sp140Q6NSQ5 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Sp140Q6NSQ5 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sp140Q6NSQ5 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sp140Q6NSQ5 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sp140Q6NSQ5 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sp140Q6NSQ5 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Sp140Q6NSQ5 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sp140Q6NSQ5 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Sp140Q6NSQ5 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sp140Q6NSQ5 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Sp140Q6NSQ5 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.26■□□□□ 0.67
Sp140Q6NSQ5 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sp140Q6NSQ5 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sp140Q6NSQ5 Gm26833-201ENSMUST00000180899 440 ntBASIC19.26■□□□□ 0.67
Sp140Q6NSQ5 Gm27801-201ENSMUST00000184174 223 ntBASIC19.26■□□□□ 0.67
Sp140Q6NSQ5 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sp140Q6NSQ5 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sp140Q6NSQ5 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Sp140Q6NSQ5 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.26■□□□□ 0.67
Sp140Q6NSQ5 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sp140Q6NSQ5 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms