Protein–RNA interactions for Protein: Q62504

Spen, Msx2-interacting protein, mousemouse

Known RBP Predictions only

Length 3,644 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpenQ62504 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SpenQ62504 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SpenQ62504 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
SpenQ62504 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
SpenQ62504 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
SpenQ62504 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
SpenQ62504 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SpenQ62504 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SpenQ62504 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.15■□□□□ 0.34
SpenQ62504 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SpenQ62504 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SpenQ62504 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SpenQ62504 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
SpenQ62504 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SpenQ62504 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.14■□□□□ 0.33
SpenQ62504 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SpenQ62504 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SpenQ62504 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SpenQ62504 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SpenQ62504 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.14■□□□□ 0.33
SpenQ62504 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SpenQ62504 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SpenQ62504 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SpenQ62504 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SpenQ62504 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SpenQ62504 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.14■□□□□ 0.33
SpenQ62504 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SpenQ62504 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SpenQ62504 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SpenQ62504 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SpenQ62504 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.13■□□□□ 0.33
SpenQ62504 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SpenQ62504 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SpenQ62504 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.13■□□□□ 0.33
SpenQ62504 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.13■□□□□ 0.33
SpenQ62504 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SpenQ62504 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SpenQ62504 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SpenQ62504 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.13■□□□□ 0.33
SpenQ62504 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SpenQ62504 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SpenQ62504 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SpenQ62504 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SpenQ62504 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SpenQ62504 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SpenQ62504 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SpenQ62504 Gm10517-202ENSMUST00000192970 758 ntBASIC17.12■□□□□ 0.33
SpenQ62504 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SpenQ62504 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SpenQ62504 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SpenQ62504 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SpenQ62504 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.12■□□□□ 0.33
SpenQ62504 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SpenQ62504 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.12■□□□□ 0.33
SpenQ62504 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SpenQ62504 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SpenQ62504 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.11■□□□□ 0.33
SpenQ62504 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SpenQ62504 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SpenQ62504 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SpenQ62504 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SpenQ62504 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SpenQ62504 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.11■□□□□ 0.33
SpenQ62504 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SpenQ62504 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SpenQ62504 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SpenQ62504 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.11■□□□□ 0.33
SpenQ62504 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SpenQ62504 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.1■□□□□ 0.33
SpenQ62504 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SpenQ62504 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SpenQ62504 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SpenQ62504 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.1■□□□□ 0.33
SpenQ62504 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SpenQ62504 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.1■□□□□ 0.33
SpenQ62504 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SpenQ62504 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SpenQ62504 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
SpenQ62504 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SpenQ62504 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.1■□□□□ 0.33
SpenQ62504 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SpenQ62504 Gm6659-201ENSMUST00000174752 547 ntBASIC17.1■□□□□ 0.33
SpenQ62504 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SpenQ62504 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.1■□□□□ 0.33
SpenQ62504 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.1■□□□□ 0.33
SpenQ62504 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SpenQ62504 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SpenQ62504 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SpenQ62504 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SpenQ62504 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SpenQ62504 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.09■□□□□ 0.33
SpenQ62504 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SpenQ62504 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SpenQ62504 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SpenQ62504 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SpenQ62504 Gm2399-201ENSMUST00000104944 225 ntBASIC17.09■□□□□ 0.33
SpenQ62504 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.09■□□□□ 0.33
SpenQ62504 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SpenQ62504 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SpenQ62504 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms