Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Six2Q62232 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Six2Q62232 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Six2Q62232 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Six2Q62232 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Six2Q62232 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Six2Q62232 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.38■□□□□ 0.85
Six2Q62232 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Six2Q62232 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Six2Q62232 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.38■□□□□ 0.85
Six2Q62232 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Six2Q62232 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.38■□□□□ 0.85
Six2Q62232 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Six2Q62232 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Six2Q62232 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Six2Q62232 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.37■□□□□ 0.85
Six2Q62232 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Six2Q62232 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
Six2Q62232 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Six2Q62232 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Six2Q62232 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.37■□□□□ 0.85
Six2Q62232 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.37■□□□□ 0.85
Six2Q62232 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Six2Q62232 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Six2Q62232 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Six2Q62232 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Six2Q62232 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Six2Q62232 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Six2Q62232 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Six2Q62232 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Six2Q62232 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Six2Q62232 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Six2Q62232 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Six2Q62232 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Six2Q62232 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.36■□□□□ 0.85
Six2Q62232 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.36■□□□□ 0.85
Six2Q62232 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.36■□□□□ 0.85
Six2Q62232 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Six2Q62232 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Six2Q62232 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Six2Q62232 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Six2Q62232 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.35■□□□□ 0.85
Six2Q62232 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Six2Q62232 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Six2Q62232 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Six2Q62232 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Six2Q62232 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.35■□□□□ 0.85
Six2Q62232 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Six2Q62232 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.35■□□□□ 0.85
Six2Q62232 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Six2Q62232 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Six2Q62232 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Six2Q62232 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Six2Q62232 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Six2Q62232 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Six2Q62232 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Six2Q62232 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Six2Q62232 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.34■□□□□ 0.85
Six2Q62232 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.34■□□□□ 0.85
Six2Q62232 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Six2Q62232 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Six2Q62232 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Six2Q62232 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Six2Q62232 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Six2Q62232 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Six2Q62232 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Six2Q62232 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Six2Q62232 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Six2Q62232 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Six2Q62232 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Six2Q62232 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Six2Q62232 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Six2Q62232 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Six2Q62232 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
Six2Q62232 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
Six2Q62232 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.33■□□□□ 0.84
Six2Q62232 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Six2Q62232 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Six2Q62232 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Six2Q62232 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Six2Q62232 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Six2Q62232 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Six2Q62232 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Six2Q62232 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Six2Q62232 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.32■□□□□ 0.84
Six2Q62232 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Six2Q62232 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Six2Q62232 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Six2Q62232 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Six2Q62232 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.32■□□□□ 0.84
Six2Q62232 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.32■□□□□ 0.84
Six2Q62232 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Six2Q62232 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.32■□□□□ 0.84
Six2Q62232 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Six2Q62232 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Six2Q62232 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Six2Q62232 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.32■□□□□ 0.84
Six2Q62232 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.32■□□□□ 0.84
Six2Q62232 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.32■□□□□ 0.84
Six2Q62232 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms