Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC21.26■□□□□ 0.99
Ecm1Q61508 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ecm1Q61508 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC21.26■□□□□ 0.99
Ecm1Q61508 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Ecm1Q61508 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ecm1Q61508 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ecm1Q61508 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ecm1Q61508 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ecm1Q61508 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Ecm1Q61508 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ecm1Q61508 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ecm1Q61508 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Ecm1Q61508 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ecm1Q61508 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ecm1Q61508 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Ecm1Q61508 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ecm1Q61508 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ecm1Q61508 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ecm1Q61508 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Ecm1Q61508 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ecm1Q61508 Mir6982-201ENSMUST00000184354 68 ntBASIC21.23■□□□□ 0.99
Ecm1Q61508 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ecm1Q61508 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ecm1Q61508 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.23■□□□□ 0.99
Ecm1Q61508 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ecm1Q61508 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ecm1Q61508 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ecm1Q61508 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ecm1Q61508 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ecm1Q61508 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ecm1Q61508 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ecm1Q61508 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ecm1Q61508 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Ecm1Q61508 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ecm1Q61508 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ecm1Q61508 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ecm1Q61508 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC21.21■□□□□ 0.99
Ecm1Q61508 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Ecm1Q61508 Gm29241-201ENSMUST00000189260 1096 ntBASIC21.21■□□□□ 0.99
Ecm1Q61508 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC21.21■□□□□ 0.99
Ecm1Q61508 Gm44549-201ENSMUST00000208351 577 ntBASIC21.21■□□□□ 0.99
Ecm1Q61508 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC21.21■□□□□ 0.99
Ecm1Q61508 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC21.21■□□□□ 0.99
Ecm1Q61508 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ecm1Q61508 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ecm1Q61508 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ecm1Q61508 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ecm1Q61508 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC21.2■□□□□ 0.98
Ecm1Q61508 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Ecm1Q61508 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Ecm1Q61508 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ecm1Q61508 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ecm1Q61508 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ecm1Q61508 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ecm1Q61508 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Ecm1Q61508 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ecm1Q61508 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ecm1Q61508 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Ecm1Q61508 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ecm1Q61508 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC21.19■□□□□ 0.98
Ecm1Q61508 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC21.19■□□□□ 0.98
Ecm1Q61508 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC21.19■□□□□ 0.98
Ecm1Q61508 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ecm1Q61508 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ecm1Q61508 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ecm1Q61508 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Ecm1Q61508 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Ecm1Q61508 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.18■□□□□ 0.98
Ecm1Q61508 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ecm1Q61508 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC21.18■□□□□ 0.98
Ecm1Q61508 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ecm1Q61508 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ecm1Q61508 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ecm1Q61508 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.18■□□□□ 0.98
Ecm1Q61508 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ecm1Q61508 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ecm1Q61508 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ecm1Q61508 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Ecm1Q61508 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ecm1Q61508 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ecm1Q61508 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ecm1Q61508 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC21.17■□□□□ 0.98
Ecm1Q61508 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ecm1Q61508 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ecm1Q61508 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
Ecm1Q61508 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.16■□□□□ 0.98
Ecm1Q61508 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ecm1Q61508 Gm43672-201ENSMUST00000199072 1731 ntBASIC21.16■□□□□ 0.98
Ecm1Q61508 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ecm1Q61508 Gm11249-201ENSMUST00000117071 859 ntBASIC21.16■□□□□ 0.98
Ecm1Q61508 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC21.16■□□□□ 0.98
Ecm1Q61508 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ecm1Q61508 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ecm1Q61508 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ecm1Q61508 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ecm1Q61508 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ecm1Q61508 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ecm1Q61508 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ecm1Q61508 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ecm1Q61508 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms