Protein–RNA interactions for Protein: Q61496

Ddx4, ATP-dependent RNA helicase DDX4, mousemouse

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx4Q61496 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx4Q61496 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC21.03■□□□□ 0.96
Ddx4Q61496 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC21.03■□□□□ 0.96
Ddx4Q61496 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Ddx4Q61496 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Ddx4Q61496 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Ddx4Q61496 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Ddx4Q61496 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Ddx4Q61496 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx4Q61496 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Ddx4Q61496 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Ddx4Q61496 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx4Q61496 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx4Q61496 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.03■□□□□ 0.96
Ddx4Q61496 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx4Q61496 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx4Q61496 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx4Q61496 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx4Q61496 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx4Q61496 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC21.02■□□□□ 0.96
Ddx4Q61496 Gm11249-201ENSMUST00000117071 859 ntBASIC21.02■□□□□ 0.96
Ddx4Q61496 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Ddx4Q61496 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx4Q61496 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx4Q61496 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx4Q61496 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Ddx4Q61496 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Ddx4Q61496 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Ddx4Q61496 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx4Q61496 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.01■□□□□ 0.95
Ddx4Q61496 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Ddx4Q61496 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.01■□□□□ 0.95
Ddx4Q61496 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx4Q61496 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx4Q61496 Gm44549-201ENSMUST00000208351 577 ntBASIC21.01■□□□□ 0.95
Ddx4Q61496 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx4Q61496 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx4Q61496 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ddx4Q61496 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ddx4Q61496 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ddx4Q61496 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Ddx4Q61496 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ddx4Q61496 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Ddx4Q61496 AC153881.1-201ENSMUST00000214448 284 ntBASIC21■□□□□ 0.95
Ddx4Q61496 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21■□□□□ 0.95
Ddx4Q61496 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ddx4Q61496 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ddx4Q61496 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Ddx4Q61496 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ddx4Q61496 Gm10698-201ENSMUST00000182663 604 ntBASIC20.99■□□□□ 0.95
Ddx4Q61496 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ddx4Q61496 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
Ddx4Q61496 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.99■□□□□ 0.95
Ddx4Q61496 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Ddx4Q61496 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx4Q61496 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx4Q61496 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Ddx4Q61496 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx4Q61496 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx4Q61496 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx4Q61496 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx4Q61496 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
Ddx4Q61496 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx4Q61496 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx4Q61496 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx4Q61496 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx4Q61496 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
Ddx4Q61496 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
Ddx4Q61496 Gm18666-201ENSMUST00000190039 958 ntBASIC20.97■□□□□ 0.95
Ddx4Q61496 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.97■□□□□ 0.95
Ddx4Q61496 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx4Q61496 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx4Q61496 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.97■□□□□ 0.95
Ddx4Q61496 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
Ddx4Q61496 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx4Q61496 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx4Q61496 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx4Q61496 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx4Q61496 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.96■□□□□ 0.95
Ddx4Q61496 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx4Q61496 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.96■□□□□ 0.95
Ddx4Q61496 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx4Q61496 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.96■□□□□ 0.95
Ddx4Q61496 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx4Q61496 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx4Q61496 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx4Q61496 Gm11643-201ENSMUST00000119578 864 ntBASIC20.96■□□□□ 0.95
Ddx4Q61496 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.96■□□□□ 0.95
Ddx4Q61496 Gm37055-201ENSMUST00000191866 133 ntBASIC20.96■□□□□ 0.95
Ddx4Q61496 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx4Q61496 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx4Q61496 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx4Q61496 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx4Q61496 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx4Q61496 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx4Q61496 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.95■□□□□ 0.94
Ddx4Q61496 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.95■□□□□ 0.94
Ddx4Q61496 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.95■□□□□ 0.94
Ddx4Q61496 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx4Q61496 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms