Protein–RNA interactions for Protein: Q61290

Cacna1e, Voltage-dependent R-type calcium channel subunit alpha-1E, mousemouse

Predictions only

Length 2,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1eQ61290 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cacna1eQ61290 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cacna1eQ61290 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cacna1eQ61290 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cacna1eQ61290 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cacna1eQ61290 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cacna1eQ61290 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cacna1eQ61290 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cacna1eQ61290 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Cacna1eQ61290 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cacna1eQ61290 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Cacna1eQ61290 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cacna1eQ61290 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.84■□□□□ 0.61
Cacna1eQ61290 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
Cacna1eQ61290 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Cacna1eQ61290 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cacna1eQ61290 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cacna1eQ61290 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.84■□□□□ 0.61
Cacna1eQ61290 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cacna1eQ61290 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Cacna1eQ61290 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cacna1eQ61290 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cacna1eQ61290 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.83■□□□□ 0.61
Cacna1eQ61290 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Cacna1eQ61290 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cacna1eQ61290 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cacna1eQ61290 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.83■□□□□ 0.6
Cacna1eQ61290 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cacna1eQ61290 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cacna1eQ61290 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Cacna1eQ61290 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cacna1eQ61290 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacna1eQ61290 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacna1eQ61290 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cacna1eQ61290 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacna1eQ61290 Gm2559-201ENSMUST00000201323 363 ntBASIC18.82■□□□□ 0.6
Cacna1eQ61290 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacna1eQ61290 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacna1eQ61290 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacna1eQ61290 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1eQ61290 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1eQ61290 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1eQ61290 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1eQ61290 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.81■□□□□ 0.6
Cacna1eQ61290 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.81■□□□□ 0.6
Cacna1eQ61290 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Cacna1eQ61290 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1eQ61290 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1eQ61290 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1eQ61290 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1eQ61290 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1eQ61290 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1eQ61290 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1eQ61290 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1eQ61290 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1eQ61290 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1eQ61290 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1eQ61290 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.8■□□□□ 0.6
Cacna1eQ61290 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1eQ61290 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1eQ61290 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Cacna1eQ61290 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1eQ61290 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1eQ61290 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1eQ61290 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.79■□□□□ 0.6
Cacna1eQ61290 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1eQ61290 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Cacna1eQ61290 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1eQ61290 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1eQ61290 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1eQ61290 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1eQ61290 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.79■□□□□ 0.6
Cacna1eQ61290 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1eQ61290 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1eQ61290 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1eQ61290 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Cacna1eQ61290 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1eQ61290 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1eQ61290 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.78■□□□□ 0.6
Cacna1eQ61290 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.78■□□□□ 0.6
Cacna1eQ61290 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.78■□□□□ 0.6
Cacna1eQ61290 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1eQ61290 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1eQ61290 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1eQ61290 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1eQ61290 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1eQ61290 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1eQ61290 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1eQ61290 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1eQ61290 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1eQ61290 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.77■□□□□ 0.6
Cacna1eQ61290 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacna1eQ61290 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cacna1eQ61290 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacna1eQ61290 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacna1eQ61290 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cacna1eQ61290 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacna1eQ61290 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacna1eQ61290 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacna1eQ61290 Gm12896-201ENSMUST00000118430 226 ntBASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms