Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Tnfaip3Q60769 Gm37179-201ENSMUST00000194862 823 ntBASIC17.87■□□□□ 0.45
Tnfaip3Q60769 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tnfaip3Q60769 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Tnfaip3Q60769 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tnfaip3Q60769 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Tnfaip3Q60769 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tnfaip3Q60769 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Tnfaip3Q60769 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tnfaip3Q60769 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Tnfaip3Q60769 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tnfaip3Q60769 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Tnfaip3Q60769 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tnfaip3Q60769 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tnfaip3Q60769 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Tnfaip3Q60769 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
Tnfaip3Q60769 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Tnfaip3Q60769 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tnfaip3Q60769 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tnfaip3Q60769 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tnfaip3Q60769 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Tnfaip3Q60769 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.86■□□□□ 0.45
Tnfaip3Q60769 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Tnfaip3Q60769 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tnfaip3Q60769 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tnfaip3Q60769 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tnfaip3Q60769 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Tnfaip3Q60769 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
Tnfaip3Q60769 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tnfaip3Q60769 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tnfaip3Q60769 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tnfaip3Q60769 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Tnfaip3Q60769 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tnfaip3Q60769 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tnfaip3Q60769 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.84■□□□□ 0.45
Tnfaip3Q60769 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tnfaip3Q60769 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Tnfaip3Q60769 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tnfaip3Q60769 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.84■□□□□ 0.45
Tnfaip3Q60769 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.84■□□□□ 0.45
Tnfaip3Q60769 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tnfaip3Q60769 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tnfaip3Q60769 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tnfaip3Q60769 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tnfaip3Q60769 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tnfaip3Q60769 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Tnfaip3Q60769 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Tnfaip3Q60769 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Tnfaip3Q60769 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tnfaip3Q60769 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.83■□□□□ 0.44
Tnfaip3Q60769 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
Tnfaip3Q60769 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Tnfaip3Q60769 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tnfaip3Q60769 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tnfaip3Q60769 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tnfaip3Q60769 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tnfaip3Q60769 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Tnfaip3Q60769 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Tnfaip3Q60769 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.82■□□□□ 0.44
Tnfaip3Q60769 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.82■□□□□ 0.44
Tnfaip3Q60769 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Tnfaip3Q60769 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfaip3Q60769 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfaip3Q60769 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.82■□□□□ 0.44
Tnfaip3Q60769 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Tnfaip3Q60769 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfaip3Q60769 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.82■□□□□ 0.44
Tnfaip3Q60769 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfaip3Q60769 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfaip3Q60769 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfaip3Q60769 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfaip3Q60769 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tnfaip3Q60769 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.81■□□□□ 0.44
Tnfaip3Q60769 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tnfaip3Q60769 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tnfaip3Q60769 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tnfaip3Q60769 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Tnfaip3Q60769 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tnfaip3Q60769 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tnfaip3Q60769 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.81■□□□□ 0.44
Tnfaip3Q60769 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.81■□□□□ 0.44
Tnfaip3Q60769 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tnfaip3Q60769 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Tnfaip3Q60769 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tnfaip3Q60769 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tnfaip3Q60769 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tnfaip3Q60769 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tnfaip3Q60769 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfaip3Q60769 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Tnfaip3Q60769 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfaip3Q60769 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfaip3Q60769 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfaip3Q60769 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfaip3Q60769 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.8■□□□□ 0.44
Tnfaip3Q60769 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfaip3Q60769 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfaip3Q60769 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfaip3Q60769 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfaip3Q60769 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfaip3Q60769 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms