Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3-1Q5R1I8 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3-1Q5R1I8 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC12.98□□□□□ -0.33
Trav3-1Q5R1I8 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3-1Q5R1I8 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3-1Q5R1I8 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3-1Q5R1I8 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav3-1Q5R1I8 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3-1Q5R1I8 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3-1Q5R1I8 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3-1Q5R1I8 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3-1Q5R1I8 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav3-1Q5R1I8 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Trav3-1Q5R1I8 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3-1Q5R1I8 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3-1Q5R1I8 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3-1Q5R1I8 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Trav3-1Q5R1I8 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3-1Q5R1I8 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav3-1Q5R1I8 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3-1Q5R1I8 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3-1Q5R1I8 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-1Q5R1I8 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC12.97□□□□□ -0.33
Trav3-1Q5R1I8 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-1Q5R1I8 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-1Q5R1I8 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-1Q5R1I8 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-1Q5R1I8 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-1Q5R1I8 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-1Q5R1I8 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC12.97□□□□□ -0.33
Trav3-1Q5R1I8 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-1Q5R1I8 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-1Q5R1I8 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav3-1Q5R1I8 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-1Q5R1I8 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-1Q5R1I8 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-1Q5R1I8 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.97□□□□□ -0.33
Trav3-1Q5R1I8 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav3-1Q5R1I8 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-1Q5R1I8 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Trav3-1Q5R1I8 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-1Q5R1I8 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav3-1Q5R1I8 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav3-1Q5R1I8 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trav3-1Q5R1I8 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav3-1Q5R1I8 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trav3-1Q5R1I8 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trav3-1Q5R1I8 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav3-1Q5R1I8 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav3-1Q5R1I8 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav3-1Q5R1I8 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC12.96□□□□□ -0.33
Trav3-1Q5R1I8 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Trav3-1Q5R1I8 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav3-1Q5R1I8 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav3-1Q5R1I8 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav3-1Q5R1I8 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav3-1Q5R1I8 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3-1Q5R1I8 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3-1Q5R1I8 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3-1Q5R1I8 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3-1Q5R1I8 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Trav3-1Q5R1I8 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3-1Q5R1I8 Dmtn-210ENSMUST00000228824 2377 ntBASIC12.95□□□□□ -0.34
Trav3-1Q5R1I8 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3-1Q5R1I8 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3-1Q5R1I8 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3-1Q5R1I8 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav3-1Q5R1I8 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-1Q5R1I8 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-1Q5R1I8 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-1Q5R1I8 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav3-1Q5R1I8 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-1Q5R1I8 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-1Q5R1I8 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-1Q5R1I8 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav3-1Q5R1I8 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-1Q5R1I8 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-1Q5R1I8 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-1Q5R1I8 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trav3-1Q5R1I8 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-1Q5R1I8 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trav3-1Q5R1I8 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-1Q5R1I8 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-1Q5R1I8 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-1Q5R1I8 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-1Q5R1I8 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-1Q5R1I8 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-1Q5R1I8 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-1Q5R1I8 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-1Q5R1I8 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav3-1Q5R1I8 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-1Q5R1I8 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-1Q5R1I8 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav3-1Q5R1I8 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav3-1Q5R1I8 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-1Q5R1I8 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-1Q5R1I8 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-1Q5R1I8 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC12.93□□□□□ -0.34
Trav3-1Q5R1I8 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-1Q5R1I8 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms