Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.74■□□□□ 0.59
Col27a1Q5QNQ9 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col27a1Q5QNQ9 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.74■□□□□ 0.59
Col27a1Q5QNQ9 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col27a1Q5QNQ9 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col27a1Q5QNQ9 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Col27a1Q5QNQ9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col27a1Q5QNQ9 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col27a1Q5QNQ9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col27a1Q5QNQ9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col27a1Q5QNQ9 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col27a1Q5QNQ9 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col27a1Q5QNQ9 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col27a1Q5QNQ9 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col27a1Q5QNQ9 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col27a1Q5QNQ9 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col27a1Q5QNQ9 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Col27a1Q5QNQ9 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col27a1Q5QNQ9 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col27a1Q5QNQ9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col27a1Q5QNQ9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.73■□□□□ 0.59
Col27a1Q5QNQ9 Gm11927-201ENSMUST00000118472 759 ntBASIC18.72■□□□□ 0.59
Col27a1Q5QNQ9 Gm10517-202ENSMUST00000192970 758 ntBASIC18.72■□□□□ 0.59
Col27a1Q5QNQ9 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.72■□□□□ 0.59
Col27a1Q5QNQ9 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col27a1Q5QNQ9 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col27a1Q5QNQ9 Gm7889-201ENSMUST00000185591 958 ntBASIC18.72■□□□□ 0.59
Col27a1Q5QNQ9 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.72■□□□□ 0.59
Col27a1Q5QNQ9 Gm21814-202ENSMUST00000203277 873 ntBASIC18.72■□□□□ 0.59
Col27a1Q5QNQ9 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.71■□□□□ 0.59
Col27a1Q5QNQ9 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Col27a1Q5QNQ9 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.71■□□□□ 0.59
Col27a1Q5QNQ9 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col27a1Q5QNQ9 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col27a1Q5QNQ9 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col27a1Q5QNQ9 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col27a1Q5QNQ9 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col27a1Q5QNQ9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Col27a1Q5QNQ9 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.7■□□□□ 0.58
Col27a1Q5QNQ9 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col27a1Q5QNQ9 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col27a1Q5QNQ9 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Col27a1Q5QNQ9 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col27a1Q5QNQ9 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.7■□□□□ 0.58
Col27a1Q5QNQ9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Col27a1Q5QNQ9 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.7■□□□□ 0.58
Col27a1Q5QNQ9 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Col27a1Q5QNQ9 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col27a1Q5QNQ9 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col27a1Q5QNQ9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col27a1Q5QNQ9 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Col27a1Q5QNQ9 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col27a1Q5QNQ9 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Col27a1Q5QNQ9 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col27a1Q5QNQ9 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Col27a1Q5QNQ9 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.69■□□□□ 0.58
Col27a1Q5QNQ9 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Col27a1Q5QNQ9 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col27a1Q5QNQ9 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col27a1Q5QNQ9 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Col27a1Q5QNQ9 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col27a1Q5QNQ9 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col27a1Q5QNQ9 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col27a1Q5QNQ9 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col27a1Q5QNQ9 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Col27a1Q5QNQ9 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col27a1Q5QNQ9 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Col27a1Q5QNQ9 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.67■□□□□ 0.58
Col27a1Q5QNQ9 Gm30025-201ENSMUST00000218555 728 ntBASIC18.67■□□□□ 0.58
Col27a1Q5QNQ9 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Col27a1Q5QNQ9 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col27a1Q5QNQ9 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col27a1Q5QNQ9 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Col27a1Q5QNQ9 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col27a1Q5QNQ9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Col27a1Q5QNQ9 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col27a1Q5QNQ9 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.67■□□□□ 0.58
Col27a1Q5QNQ9 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Col27a1Q5QNQ9 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Col27a1Q5QNQ9 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.67■□□□□ 0.58
Col27a1Q5QNQ9 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.67■□□□□ 0.58
Col27a1Q5QNQ9 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col27a1Q5QNQ9 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col27a1Q5QNQ9 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col27a1Q5QNQ9 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col27a1Q5QNQ9 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col27a1Q5QNQ9 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Col27a1Q5QNQ9 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Col27a1Q5QNQ9 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col27a1Q5QNQ9 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Col27a1Q5QNQ9 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col27a1Q5QNQ9 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.66■□□□□ 0.58
Col27a1Q5QNQ9 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col27a1Q5QNQ9 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Col27a1Q5QNQ9 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col27a1Q5QNQ9 Gm3375-201ENSMUST00000203929 796 ntBASIC18.65■□□□□ 0.58
Col27a1Q5QNQ9 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.65■□□□□ 0.58
Col27a1Q5QNQ9 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col27a1Q5QNQ9 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col27a1Q5QNQ9 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms