Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scn2bQ56A07 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scn2bQ56A07 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
Scn2bQ56A07 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scn2bQ56A07 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scn2bQ56A07 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn2bQ56A07 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn2bQ56A07 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Scn2bQ56A07 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Scn2bQ56A07 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn2bQ56A07 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Scn2bQ56A07 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Scn2bQ56A07 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn2bQ56A07 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn2bQ56A07 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Scn2bQ56A07 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn2bQ56A07 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Scn2bQ56A07 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn2bQ56A07 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Scn2bQ56A07 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn2bQ56A07 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Scn2bQ56A07 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn2bQ56A07 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn2bQ56A07 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Scn2bQ56A07 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Scn2bQ56A07 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn2bQ56A07 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Scn2bQ56A07 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.81■□□□□ 0.6
Scn2bQ56A07 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Scn2bQ56A07 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn2bQ56A07 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Scn2bQ56A07 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Scn2bQ56A07 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn2bQ56A07 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn2bQ56A07 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Scn2bQ56A07 Mir7075-201ENSMUST00000184187 82 ntBASIC18.8■□□□□ 0.6
Scn2bQ56A07 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn2bQ56A07 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn2bQ56A07 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn2bQ56A07 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn2bQ56A07 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn2bQ56A07 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn2bQ56A07 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn2bQ56A07 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Scn2bQ56A07 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn2bQ56A07 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Scn2bQ56A07 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn2bQ56A07 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn2bQ56A07 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn2bQ56A07 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Scn2bQ56A07 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn2bQ56A07 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Scn2bQ56A07 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Scn2bQ56A07 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Scn2bQ56A07 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn2bQ56A07 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn2bQ56A07 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Scn2bQ56A07 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.79■□□□□ 0.6
Scn2bQ56A07 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Scn2bQ56A07 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.78■□□□□ 0.6
Scn2bQ56A07 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn2bQ56A07 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.78■□□□□ 0.6
Scn2bQ56A07 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn2bQ56A07 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn2bQ56A07 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn2bQ56A07 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Scn2bQ56A07 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn2bQ56A07 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.78■□□□□ 0.6
Scn2bQ56A07 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Scn2bQ56A07 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn2bQ56A07 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Scn2bQ56A07 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Scn2bQ56A07 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn2bQ56A07 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn2bQ56A07 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Scn2bQ56A07 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.78■□□□□ 0.6
Scn2bQ56A07 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scn2bQ56A07 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scn2bQ56A07 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Scn2bQ56A07 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.77■□□□□ 0.6
Scn2bQ56A07 Gm15039-201ENSMUST00000118914 875 ntBASIC18.77■□□□□ 0.6
Scn2bQ56A07 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scn2bQ56A07 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Scn2bQ56A07 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.77■□□□□ 0.6
Scn2bQ56A07 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scn2bQ56A07 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Scn2bQ56A07 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Scn2bQ56A07 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Scn2bQ56A07 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Scn2bQ56A07 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Scn2bQ56A07 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Scn2bQ56A07 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Scn2bQ56A07 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn2bQ56A07 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn2bQ56A07 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn2bQ56A07 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Scn2bQ56A07 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.76■□□□□ 0.59
Scn2bQ56A07 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn2bQ56A07 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Scn2bQ56A07 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms