Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC22.09■■□□□ 1.13
Rc3h1Q4VGL6 Spcs1-207ENSMUST00000228767 1008 ntBASIC22.09■■□□□ 1.13
Rc3h1Q4VGL6 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Rc3h1Q4VGL6 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rc3h1Q4VGL6 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rc3h1Q4VGL6 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rc3h1Q4VGL6 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rc3h1Q4VGL6 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Rc3h1Q4VGL6 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Rc3h1Q4VGL6 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
Rc3h1Q4VGL6 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Rc3h1Q4VGL6 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Rc3h1Q4VGL6 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC22.08■■□□□ 1.13
Rc3h1Q4VGL6 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Rc3h1Q4VGL6 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC22.08■■□□□ 1.13
Rc3h1Q4VGL6 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC22.08■■□□□ 1.13
Rc3h1Q4VGL6 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Rc3h1Q4VGL6 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Rc3h1Q4VGL6 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Rc3h1Q4VGL6 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Rc3h1Q4VGL6 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Rc3h1Q4VGL6 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.12
Rc3h1Q4VGL6 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Rc3h1Q4VGL6 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Rc3h1Q4VGL6 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Rc3h1Q4VGL6 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Rc3h1Q4VGL6 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rc3h1Q4VGL6 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rc3h1Q4VGL6 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC22.07■■□□□ 1.12
Rc3h1Q4VGL6 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rc3h1Q4VGL6 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rc3h1Q4VGL6 AC131586.2-201ENSMUST00000228370 1512 ntBASIC22.07■■□□□ 1.12
Rc3h1Q4VGL6 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC22.07■■□□□ 1.12
Rc3h1Q4VGL6 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rc3h1Q4VGL6 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC22.07■■□□□ 1.12
Rc3h1Q4VGL6 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
Rc3h1Q4VGL6 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
Rc3h1Q4VGL6 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
Rc3h1Q4VGL6 Gm26971-201ENSMUST00000182423 1072 ntBASIC22.07■■□□□ 1.12
Rc3h1Q4VGL6 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rc3h1Q4VGL6 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rc3h1Q4VGL6 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rc3h1Q4VGL6 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rc3h1Q4VGL6 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Rc3h1Q4VGL6 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rc3h1Q4VGL6 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC22.06■■□□□ 1.12
Rc3h1Q4VGL6 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Rc3h1Q4VGL6 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rc3h1Q4VGL6 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rc3h1Q4VGL6 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC22.06■■□□□ 1.12
Rc3h1Q4VGL6 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC22.06■■□□□ 1.12
Rc3h1Q4VGL6 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rc3h1Q4VGL6 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rc3h1Q4VGL6 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rc3h1Q4VGL6 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Rc3h1Q4VGL6 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rc3h1Q4VGL6 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC22.05■■□□□ 1.12
Rc3h1Q4VGL6 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Rc3h1Q4VGL6 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Rc3h1Q4VGL6 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Rc3h1Q4VGL6 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rc3h1Q4VGL6 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rc3h1Q4VGL6 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Rc3h1Q4VGL6 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rc3h1Q4VGL6 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Rc3h1Q4VGL6 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rc3h1Q4VGL6 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rc3h1Q4VGL6 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Rc3h1Q4VGL6 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rc3h1Q4VGL6 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Rc3h1Q4VGL6 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Rc3h1Q4VGL6 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
Rc3h1Q4VGL6 Gm12669-201ENSMUST00000122162 1009 ntBASIC22.04■■□□□ 1.12
Rc3h1Q4VGL6 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rc3h1Q4VGL6 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rc3h1Q4VGL6 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rc3h1Q4VGL6 Gm7290-201ENSMUST00000104990 617 ntBASIC22.03■■□□□ 1.12
Rc3h1Q4VGL6 Gm12918-201ENSMUST00000120234 636 ntBASIC22.03■■□□□ 1.12
Rc3h1Q4VGL6 Gm15710-201ENSMUST00000121821 636 ntBASIC22.03■■□□□ 1.12
Rc3h1Q4VGL6 Gm5075-201ENSMUST00000196916 622 ntBASIC22.03■■□□□ 1.12
Rc3h1Q4VGL6 AC112142.1-201ENSMUST00000228796 918 ntBASIC22.03■■□□□ 1.12
Rc3h1Q4VGL6 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rc3h1Q4VGL6 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC22.03■■□□□ 1.12
Rc3h1Q4VGL6 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC22.03■■□□□ 1.12
Rc3h1Q4VGL6 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rc3h1Q4VGL6 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rc3h1Q4VGL6 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Rc3h1Q4VGL6 Gm43859-201ENSMUST00000200075 1412 ntBASIC22.03■■□□□ 1.12
Rc3h1Q4VGL6 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rc3h1Q4VGL6 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Rc3h1Q4VGL6 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rc3h1Q4VGL6 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Rc3h1Q4VGL6 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rc3h1Q4VGL6 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rc3h1Q4VGL6 Gm4968-201ENSMUST00000071458 858 ntBASIC22.02■■□□□ 1.12
Rc3h1Q4VGL6 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rc3h1Q4VGL6 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rc3h1Q4VGL6 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rc3h1Q4VGL6 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC22.01■■□□□ 1.11
Rc3h1Q4VGL6 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms