Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Gm43672-201ENSMUST00000199072 1731 ntBASIC28.41■■■□□ 2.14
Arhgef40Q3UPH7 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC28.41■■■□□ 2.14
Arhgef40Q3UPH7 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Arhgef40Q3UPH7 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC28.41■■■□□ 2.14
Arhgef40Q3UPH7 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Arhgef40Q3UPH7 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC28.4■■■□□ 2.14
Arhgef40Q3UPH7 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Arhgef40Q3UPH7 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC28.4■■■□□ 2.14
Arhgef40Q3UPH7 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC28.4■■■□□ 2.14
Arhgef40Q3UPH7 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC28.4■■■□□ 2.14
Arhgef40Q3UPH7 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Arhgef40Q3UPH7 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC28.4■■■□□ 2.14
Arhgef40Q3UPH7 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Arhgef40Q3UPH7 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
Arhgef40Q3UPH7 Gm5643-201ENSMUST00000117081 966 ntBASIC28.39■■■□□ 2.14
Arhgef40Q3UPH7 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC28.39■■■□□ 2.14
Arhgef40Q3UPH7 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Arhgef40Q3UPH7 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Arhgef40Q3UPH7 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Arhgef40Q3UPH7 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC28.39■■■□□ 2.14
Arhgef40Q3UPH7 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Arhgef40Q3UPH7 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Arhgef40Q3UPH7 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC28.38■■■□□ 2.13
Arhgef40Q3UPH7 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Arhgef40Q3UPH7 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC28.38■■■□□ 2.13
Arhgef40Q3UPH7 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Arhgef40Q3UPH7 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC28.38■■■□□ 2.13
Arhgef40Q3UPH7 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Arhgef40Q3UPH7 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Arhgef40Q3UPH7 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Arhgef40Q3UPH7 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Arhgef40Q3UPH7 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Arhgef40Q3UPH7 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC28.37■■■□□ 2.13
Arhgef40Q3UPH7 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC28.37■■■□□ 2.13
Arhgef40Q3UPH7 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Arhgef40Q3UPH7 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC28.36■■■□□ 2.13
Arhgef40Q3UPH7 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Arhgef40Q3UPH7 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Arhgef40Q3UPH7 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Arhgef40Q3UPH7 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Arhgef40Q3UPH7 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
Arhgef40Q3UPH7 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Arhgef40Q3UPH7 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
Arhgef40Q3UPH7 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Arhgef40Q3UPH7 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
Arhgef40Q3UPH7 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Arhgef40Q3UPH7 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Arhgef40Q3UPH7 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Arhgef40Q3UPH7 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Arhgef40Q3UPH7 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC28.34■■■□□ 2.13
Arhgef40Q3UPH7 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
Arhgef40Q3UPH7 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
Arhgef40Q3UPH7 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Arhgef40Q3UPH7 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC28.34■■■□□ 2.13
Arhgef40Q3UPH7 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Arhgef40Q3UPH7 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Arhgef40Q3UPH7 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Arhgef40Q3UPH7 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Arhgef40Q3UPH7 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
Arhgef40Q3UPH7 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Arhgef40Q3UPH7 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
Arhgef40Q3UPH7 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Arhgef40Q3UPH7 Gm11249-201ENSMUST00000117071 859 ntBASIC28.33■■■□□ 2.13
Arhgef40Q3UPH7 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Arhgef40Q3UPH7 Gm2559-201ENSMUST00000201323 363 ntBASIC28.33■■■□□ 2.13
Arhgef40Q3UPH7 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC28.33■■■□□ 2.13
Arhgef40Q3UPH7 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Arhgef40Q3UPH7 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Arhgef40Q3UPH7 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Arhgef40Q3UPH7 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Arhgef40Q3UPH7 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC28.33■■■□□ 2.13
Arhgef40Q3UPH7 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Arhgef40Q3UPH7 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Arhgef40Q3UPH7 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
Arhgef40Q3UPH7 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC28.32■■■□□ 2.12
Arhgef40Q3UPH7 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC28.32■■■□□ 2.12
Arhgef40Q3UPH7 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
Arhgef40Q3UPH7 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
Arhgef40Q3UPH7 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC28.32■■■□□ 2.12
Arhgef40Q3UPH7 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Arhgef40Q3UPH7 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Arhgef40Q3UPH7 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Arhgef40Q3UPH7 Gm37352-201ENSMUST00000193908 2181 ntBASIC28.31■■■□□ 2.12
Arhgef40Q3UPH7 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC28.31■■■□□ 2.12
Arhgef40Q3UPH7 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Arhgef40Q3UPH7 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Arhgef40Q3UPH7 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Arhgef40Q3UPH7 Gm10698-201ENSMUST00000182663 604 ntBASIC28.31■■■□□ 2.12
Arhgef40Q3UPH7 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
Arhgef40Q3UPH7 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Arhgef40Q3UPH7 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC28.31■■■□□ 2.12
Arhgef40Q3UPH7 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
Arhgef40Q3UPH7 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Arhgef40Q3UPH7 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
Arhgef40Q3UPH7 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC28.3■■■□□ 2.12
Arhgef40Q3UPH7 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
Arhgef40Q3UPH7 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC28.3■■■□□ 2.12
Arhgef40Q3UPH7 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Arhgef40Q3UPH7 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Arhgef40Q3UPH7 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms