Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smcr8Q3UMB5 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Smcr8Q3UMB5 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Smcr8Q3UMB5 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smcr8Q3UMB5 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smcr8Q3UMB5 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Smcr8Q3UMB5 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smcr8Q3UMB5 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.45■□□□□ 0.86
Smcr8Q3UMB5 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smcr8Q3UMB5 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smcr8Q3UMB5 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smcr8Q3UMB5 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smcr8Q3UMB5 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Smcr8Q3UMB5 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smcr8Q3UMB5 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Smcr8Q3UMB5 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Smcr8Q3UMB5 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Smcr8Q3UMB5 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smcr8Q3UMB5 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smcr8Q3UMB5 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Smcr8Q3UMB5 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smcr8Q3UMB5 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smcr8Q3UMB5 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Smcr8Q3UMB5 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smcr8Q3UMB5 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Smcr8Q3UMB5 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smcr8Q3UMB5 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Smcr8Q3UMB5 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Smcr8Q3UMB5 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smcr8Q3UMB5 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Smcr8Q3UMB5 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.43■□□□□ 0.86
Smcr8Q3UMB5 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
Smcr8Q3UMB5 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.43■□□□□ 0.86
Smcr8Q3UMB5 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.43■□□□□ 0.86
Smcr8Q3UMB5 Gm6420-201ENSMUST00000193885 723 ntBASIC20.43■□□□□ 0.86
Smcr8Q3UMB5 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smcr8Q3UMB5 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smcr8Q3UMB5 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smcr8Q3UMB5 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Smcr8Q3UMB5 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.42■□□□□ 0.86
Smcr8Q3UMB5 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.42■□□□□ 0.86
Smcr8Q3UMB5 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Smcr8Q3UMB5 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.42■□□□□ 0.86
Smcr8Q3UMB5 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.42■□□□□ 0.86
Smcr8Q3UMB5 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Smcr8Q3UMB5 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smcr8Q3UMB5 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smcr8Q3UMB5 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Smcr8Q3UMB5 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smcr8Q3UMB5 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.42■□□□□ 0.86
Smcr8Q3UMB5 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Smcr8Q3UMB5 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smcr8Q3UMB5 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smcr8Q3UMB5 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Smcr8Q3UMB5 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smcr8Q3UMB5 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smcr8Q3UMB5 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.41■□□□□ 0.86
Smcr8Q3UMB5 Nespas-201ENSMUST00000143738 1083 ntBASIC20.41■□□□□ 0.86
Smcr8Q3UMB5 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.41■□□□□ 0.86
Smcr8Q3UMB5 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.41■□□□□ 0.86
Smcr8Q3UMB5 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smcr8Q3UMB5 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smcr8Q3UMB5 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Smcr8Q3UMB5 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smcr8Q3UMB5 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smcr8Q3UMB5 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smcr8Q3UMB5 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smcr8Q3UMB5 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smcr8Q3UMB5 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
Smcr8Q3UMB5 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Smcr8Q3UMB5 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Smcr8Q3UMB5 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Smcr8Q3UMB5 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smcr8Q3UMB5 Gm7860-201ENSMUST00000121190 879 ntBASIC20.39■□□□□ 0.85
Smcr8Q3UMB5 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Smcr8Q3UMB5 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smcr8Q3UMB5 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smcr8Q3UMB5 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smcr8Q3UMB5 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smcr8Q3UMB5 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smcr8Q3UMB5 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smcr8Q3UMB5 Gm13534-201ENSMUST00000121169 513 ntBASIC20.38■□□□□ 0.85
Smcr8Q3UMB5 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Smcr8Q3UMB5 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.38■□□□□ 0.85
Smcr8Q3UMB5 Gm6365-201ENSMUST00000054711 744 ntBASIC20.38■□□□□ 0.85
Smcr8Q3UMB5 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Smcr8Q3UMB5 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.38■□□□□ 0.85
Smcr8Q3UMB5 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smcr8Q3UMB5 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smcr8Q3UMB5 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.37■□□□□ 0.85
Smcr8Q3UMB5 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smcr8Q3UMB5 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smcr8Q3UMB5 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Smcr8Q3UMB5 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smcr8Q3UMB5 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smcr8Q3UMB5 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Smcr8Q3UMB5 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smcr8Q3UMB5 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Smcr8Q3UMB5 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smcr8Q3UMB5 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms