Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf44Q3UHJ8 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.4■□□□□ 0.54
Rnf44Q3UHJ8 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf44Q3UHJ8 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Rnf44Q3UHJ8 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf44Q3UHJ8 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf44Q3UHJ8 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Rnf44Q3UHJ8 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Rnf44Q3UHJ8 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf44Q3UHJ8 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.39■□□□□ 0.53
Rnf44Q3UHJ8 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf44Q3UHJ8 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf44Q3UHJ8 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Rnf44Q3UHJ8 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf44Q3UHJ8 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf44Q3UHJ8 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Rnf44Q3UHJ8 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Rnf44Q3UHJ8 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf44Q3UHJ8 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf44Q3UHJ8 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf44Q3UHJ8 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf44Q3UHJ8 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Rnf44Q3UHJ8 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Rnf44Q3UHJ8 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf44Q3UHJ8 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf44Q3UHJ8 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.38■□□□□ 0.53
Rnf44Q3UHJ8 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.38■□□□□ 0.53
Rnf44Q3UHJ8 Gm38205-201ENSMUST00000192243 258 ntBASIC18.38■□□□□ 0.53
Rnf44Q3UHJ8 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf44Q3UHJ8 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf44Q3UHJ8 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf44Q3UHJ8 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.37■□□□□ 0.53
Rnf44Q3UHJ8 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf44Q3UHJ8 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf44Q3UHJ8 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf44Q3UHJ8 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.37■□□□□ 0.53
Rnf44Q3UHJ8 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf44Q3UHJ8 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf44Q3UHJ8 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf44Q3UHJ8 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf44Q3UHJ8 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf44Q3UHJ8 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Rnf44Q3UHJ8 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.37■□□□□ 0.53
Rnf44Q3UHJ8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf44Q3UHJ8 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf44Q3UHJ8 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf44Q3UHJ8 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf44Q3UHJ8 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf44Q3UHJ8 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf44Q3UHJ8 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf44Q3UHJ8 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Rnf44Q3UHJ8 Gm13234-201ENSMUST00000120010 747 ntBASIC18.36■□□□□ 0.53
Rnf44Q3UHJ8 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Rnf44Q3UHJ8 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf44Q3UHJ8 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Rnf44Q3UHJ8 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.36■□□□□ 0.53
Rnf44Q3UHJ8 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.36■□□□□ 0.53
Rnf44Q3UHJ8 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.36■□□□□ 0.53
Rnf44Q3UHJ8 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf44Q3UHJ8 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf44Q3UHJ8 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf44Q3UHJ8 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Rnf44Q3UHJ8 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf44Q3UHJ8 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf44Q3UHJ8 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf44Q3UHJ8 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.35■□□□□ 0.53
Rnf44Q3UHJ8 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf44Q3UHJ8 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf44Q3UHJ8 Gm10033-202ENSMUST00000211874 928 ntBASIC18.35■□□□□ 0.53
Rnf44Q3UHJ8 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf44Q3UHJ8 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf44Q3UHJ8 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf44Q3UHJ8 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
Rnf44Q3UHJ8 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf44Q3UHJ8 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf44Q3UHJ8 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf44Q3UHJ8 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf44Q3UHJ8 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf44Q3UHJ8 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf44Q3UHJ8 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf44Q3UHJ8 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Rnf44Q3UHJ8 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf44Q3UHJ8 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.34■□□□□ 0.53
Rnf44Q3UHJ8 Gm42778-201ENSMUST00000199644 553 ntBASIC18.34■□□□□ 0.53
Rnf44Q3UHJ8 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.34■□□□□ 0.53
Rnf44Q3UHJ8 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf44Q3UHJ8 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf44Q3UHJ8 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Rnf44Q3UHJ8 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf44Q3UHJ8 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
Rnf44Q3UHJ8 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf44Q3UHJ8 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf44Q3UHJ8 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf44Q3UHJ8 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf44Q3UHJ8 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Rnf44Q3UHJ8 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.33■□□□□ 0.52
Rnf44Q3UHJ8 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf44Q3UHJ8 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf44Q3UHJ8 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf44Q3UHJ8 Gm42642-201ENSMUST00000200683 355 ntBASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms