Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Snx27Q3UHD6 Gm12441-201ENSMUST00000121806 588 ntBASIC20.66■□□□□ 0.9
Snx27Q3UHD6 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snx27Q3UHD6 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.66■□□□□ 0.9
Snx27Q3UHD6 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.66■□□□□ 0.9
Snx27Q3UHD6 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snx27Q3UHD6 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snx27Q3UHD6 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snx27Q3UHD6 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snx27Q3UHD6 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snx27Q3UHD6 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Snx27Q3UHD6 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Snx27Q3UHD6 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Snx27Q3UHD6 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Snx27Q3UHD6 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Snx27Q3UHD6 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Snx27Q3UHD6 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Snx27Q3UHD6 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Snx27Q3UHD6 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Snx27Q3UHD6 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.65■□□□□ 0.9
Snx27Q3UHD6 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Snx27Q3UHD6 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Snx27Q3UHD6 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Snx27Q3UHD6 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Snx27Q3UHD6 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Snx27Q3UHD6 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Snx27Q3UHD6 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.64■□□□□ 0.89
Snx27Q3UHD6 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Snx27Q3UHD6 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Snx27Q3UHD6 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.64■□□□□ 0.89
Snx27Q3UHD6 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.64■□□□□ 0.89
Snx27Q3UHD6 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.64■□□□□ 0.89
Snx27Q3UHD6 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
Snx27Q3UHD6 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Snx27Q3UHD6 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Snx27Q3UHD6 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Snx27Q3UHD6 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Snx27Q3UHD6 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Snx27Q3UHD6 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Snx27Q3UHD6 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Snx27Q3UHD6 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Snx27Q3UHD6 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snx27Q3UHD6 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snx27Q3UHD6 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snx27Q3UHD6 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Snx27Q3UHD6 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Snx27Q3UHD6 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snx27Q3UHD6 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snx27Q3UHD6 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Snx27Q3UHD6 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snx27Q3UHD6 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snx27Q3UHD6 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Snx27Q3UHD6 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snx27Q3UHD6 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Snx27Q3UHD6 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
Snx27Q3UHD6 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Snx27Q3UHD6 Gm5408-201ENSMUST00000197998 747 ntBASIC20.62■□□□□ 0.89
Snx27Q3UHD6 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Snx27Q3UHD6 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snx27Q3UHD6 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snx27Q3UHD6 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.62■□□□□ 0.89
Snx27Q3UHD6 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Snx27Q3UHD6 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snx27Q3UHD6 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snx27Q3UHD6 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Snx27Q3UHD6 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Snx27Q3UHD6 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Snx27Q3UHD6 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Snx27Q3UHD6 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.61■□□□□ 0.89
Snx27Q3UHD6 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.61■□□□□ 0.89
Snx27Q3UHD6 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.61■□□□□ 0.89
Snx27Q3UHD6 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Snx27Q3UHD6 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Snx27Q3UHD6 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Snx27Q3UHD6 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Snx27Q3UHD6 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Snx27Q3UHD6 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Snx27Q3UHD6 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Snx27Q3UHD6 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Snx27Q3UHD6 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Snx27Q3UHD6 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Snx27Q3UHD6 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.6■□□□□ 0.89
Snx27Q3UHD6 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.6■□□□□ 0.89
Snx27Q3UHD6 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.6■□□□□ 0.89
Snx27Q3UHD6 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
Snx27Q3UHD6 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Snx27Q3UHD6 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Snx27Q3UHD6 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Snx27Q3UHD6 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Snx27Q3UHD6 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Snx27Q3UHD6 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Snx27Q3UHD6 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
Snx27Q3UHD6 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.59■□□□□ 0.89
Snx27Q3UHD6 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Snx27Q3UHD6 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Snx27Q3UHD6 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Snx27Q3UHD6 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Snx27Q3UHD6 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Snx27Q3UHD6 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Snx27Q3UHD6 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms