Protein–RNA interactions for Protein: Q3UFQ8

Carmil3, Capping protein, Arp2/3 and myosin-I linker protein 3, mousemouse

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Carmil3Q3UFQ8 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Carmil3Q3UFQ8 AC131586.2-201ENSMUST00000228370 1512 ntBASIC23.08■■□□□ 1.29
Carmil3Q3UFQ8 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Carmil3Q3UFQ8 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Carmil3Q3UFQ8 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC23.07■■□□□ 1.28
Carmil3Q3UFQ8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Carmil3Q3UFQ8 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Carmil3Q3UFQ8 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Carmil3Q3UFQ8 Trmt13-210ENSMUST00000198454 880 ntBASIC23.07■■□□□ 1.28
Carmil3Q3UFQ8 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Carmil3Q3UFQ8 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC23.06■■□□□ 1.28
Carmil3Q3UFQ8 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
Carmil3Q3UFQ8 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC23.06■■□□□ 1.28
Carmil3Q3UFQ8 Gm44878-201ENSMUST00000205812 1295 ntBASIC23.06■■□□□ 1.28
Carmil3Q3UFQ8 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Carmil3Q3UFQ8 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Carmil3Q3UFQ8 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
Carmil3Q3UFQ8 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC23.06■■□□□ 1.28
Carmil3Q3UFQ8 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Carmil3Q3UFQ8 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Carmil3Q3UFQ8 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Carmil3Q3UFQ8 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC23.05■■□□□ 1.28
Carmil3Q3UFQ8 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Carmil3Q3UFQ8 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Carmil3Q3UFQ8 Gm44672-201ENSMUST00000206944 1098 ntBASIC23.05■■□□□ 1.28
Carmil3Q3UFQ8 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Carmil3Q3UFQ8 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Carmil3Q3UFQ8 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC23.05■■□□□ 1.28
Carmil3Q3UFQ8 Notumos-201ENSMUST00000151998 2659 ntBASIC23.05■■□□□ 1.28
Carmil3Q3UFQ8 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Carmil3Q3UFQ8 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Carmil3Q3UFQ8 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
Carmil3Q3UFQ8 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Carmil3Q3UFQ8 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Carmil3Q3UFQ8 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC23.04■■□□□ 1.28
Carmil3Q3UFQ8 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
Carmil3Q3UFQ8 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Carmil3Q3UFQ8 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Carmil3Q3UFQ8 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC23.03■■□□□ 1.28
Carmil3Q3UFQ8 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Carmil3Q3UFQ8 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Carmil3Q3UFQ8 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
Carmil3Q3UFQ8 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Carmil3Q3UFQ8 Gm37563-201ENSMUST00000192580 1513 ntBASIC23.03■■□□□ 1.28
Carmil3Q3UFQ8 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Carmil3Q3UFQ8 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
Carmil3Q3UFQ8 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Carmil3Q3UFQ8 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Carmil3Q3UFQ8 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Carmil3Q3UFQ8 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Carmil3Q3UFQ8 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Carmil3Q3UFQ8 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Carmil3Q3UFQ8 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Carmil3Q3UFQ8 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC23.02■■□□□ 1.28
Carmil3Q3UFQ8 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Carmil3Q3UFQ8 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC23.02■■□□□ 1.28
Carmil3Q3UFQ8 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC23.02■■□□□ 1.28
Carmil3Q3UFQ8 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Carmil3Q3UFQ8 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Carmil3Q3UFQ8 Gm10812-201ENSMUST00000099864 546 ntBASIC23.02■■□□□ 1.28
Carmil3Q3UFQ8 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Carmil3Q3UFQ8 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Carmil3Q3UFQ8 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC23.02■■□□□ 1.28
Carmil3Q3UFQ8 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Carmil3Q3UFQ8 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Carmil3Q3UFQ8 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Carmil3Q3UFQ8 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Carmil3Q3UFQ8 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Carmil3Q3UFQ8 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Carmil3Q3UFQ8 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Carmil3Q3UFQ8 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC23.01■■□□□ 1.27
Carmil3Q3UFQ8 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Carmil3Q3UFQ8 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Carmil3Q3UFQ8 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Carmil3Q3UFQ8 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC23.01■■□□□ 1.27
Carmil3Q3UFQ8 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC23.01■■□□□ 1.27
Carmil3Q3UFQ8 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Carmil3Q3UFQ8 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Carmil3Q3UFQ8 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC23■■□□□ 1.27
Carmil3Q3UFQ8 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Carmil3Q3UFQ8 Gm20100-201ENSMUST00000209418 2272 ntBASIC23■■□□□ 1.27
Carmil3Q3UFQ8 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Carmil3Q3UFQ8 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Carmil3Q3UFQ8 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Carmil3Q3UFQ8 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Carmil3Q3UFQ8 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC23■■□□□ 1.27
Carmil3Q3UFQ8 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Carmil3Q3UFQ8 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Carmil3Q3UFQ8 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Carmil3Q3UFQ8 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Carmil3Q3UFQ8 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Carmil3Q3UFQ8 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Carmil3Q3UFQ8 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Carmil3Q3UFQ8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Carmil3Q3UFQ8 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
Carmil3Q3UFQ8 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
Carmil3Q3UFQ8 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
Carmil3Q3UFQ8 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC22.98■■□□□ 1.27
Carmil3Q3UFQ8 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
Carmil3Q3UFQ8 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms