Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC22.89■■□□□ 1.25
Col5a2Q3U962 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
Col5a2Q3U962 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Col5a2Q3U962 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Col5a2Q3U962 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Col5a2Q3U962 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC22.89■■□□□ 1.25
Col5a2Q3U962 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Col5a2Q3U962 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC22.88■■□□□ 1.25
Col5a2Q3U962 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Col5a2Q3U962 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
Col5a2Q3U962 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC22.87■■□□□ 1.25
Col5a2Q3U962 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Col5a2Q3U962 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Col5a2Q3U962 AC175538.1-201ENSMUST00000225343 1269 ntBASIC22.87■■□□□ 1.25
Col5a2Q3U962 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
Col5a2Q3U962 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC22.87■■□□□ 1.25
Col5a2Q3U962 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Col5a2Q3U962 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Col5a2Q3U962 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Col5a2Q3U962 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Col5a2Q3U962 Gm20472-201ENSMUST00000174403 1240 ntBASIC22.86■■□□□ 1.25
Col5a2Q3U962 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Col5a2Q3U962 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Col5a2Q3U962 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Col5a2Q3U962 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Col5a2Q3U962 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Col5a2Q3U962 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Col5a2Q3U962 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Col5a2Q3U962 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC22.85■■□□□ 1.25
Col5a2Q3U962 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Col5a2Q3U962 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Col5a2Q3U962 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Col5a2Q3U962 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Col5a2Q3U962 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Col5a2Q3U962 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Col5a2Q3U962 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Col5a2Q3U962 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Col5a2Q3U962 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Col5a2Q3U962 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Col5a2Q3U962 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Col5a2Q3U962 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Col5a2Q3U962 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Col5a2Q3U962 H2-K2-201ENSMUST00000174250 1049 ntBASIC22.85■■□□□ 1.25
Col5a2Q3U962 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC22.85■■□□□ 1.25
Col5a2Q3U962 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Col5a2Q3U962 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Col5a2Q3U962 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Col5a2Q3U962 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.85■■□□□ 1.25
Col5a2Q3U962 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Col5a2Q3U962 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Col5a2Q3U962 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Col5a2Q3U962 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC22.84■■□□□ 1.25
Col5a2Q3U962 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Col5a2Q3U962 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Col5a2Q3U962 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Col5a2Q3U962 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
Col5a2Q3U962 Gm6433-201ENSMUST00000118634 875 ntBASIC22.84■■□□□ 1.25
Col5a2Q3U962 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Col5a2Q3U962 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC22.84■■□□□ 1.25
Col5a2Q3U962 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Col5a2Q3U962 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
Col5a2Q3U962 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Col5a2Q3U962 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC22.84■■□□□ 1.25
Col5a2Q3U962 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC22.84■■□□□ 1.25
Col5a2Q3U962 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Col5a2Q3U962 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Col5a2Q3U962 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Col5a2Q3U962 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC22.83■■□□□ 1.25
Col5a2Q3U962 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Col5a2Q3U962 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC22.83■■□□□ 1.25
Col5a2Q3U962 Gm13158-201ENSMUST00000122007 736 ntBASIC22.83■■□□□ 1.25
Col5a2Q3U962 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC22.83■■□□□ 1.25
Col5a2Q3U962 Gm43799-201ENSMUST00000201845 579 ntBASIC22.83■■□□□ 1.25
Col5a2Q3U962 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Col5a2Q3U962 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
Col5a2Q3U962 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Col5a2Q3U962 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
Col5a2Q3U962 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Col5a2Q3U962 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Col5a2Q3U962 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Col5a2Q3U962 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Col5a2Q3U962 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC22.82■■□□□ 1.24
Col5a2Q3U962 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Col5a2Q3U962 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Col5a2Q3U962 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Col5a2Q3U962 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Col5a2Q3U962 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC22.81■■□□□ 1.24
Col5a2Q3U962 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
Col5a2Q3U962 Gm26971-201ENSMUST00000182423 1072 ntBASIC22.81■■□□□ 1.24
Col5a2Q3U962 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Col5a2Q3U962 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Col5a2Q3U962 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Col5a2Q3U962 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
Col5a2Q3U962 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Col5a2Q3U962 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Col5a2Q3U962 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Col5a2Q3U962 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC22.8■■□□□ 1.24
Col5a2Q3U962 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Col5a2Q3U962 Gm43672-201ENSMUST00000199072 1731 ntBASIC22.8■■□□□ 1.24
Col5a2Q3U962 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms