Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cul4aQ3TCH7 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.02■□□□□ 0.8
Cul4aQ3TCH7 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.02■□□□□ 0.8
Cul4aQ3TCH7 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cul4aQ3TCH7 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cul4aQ3TCH7 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.02■□□□□ 0.8
Cul4aQ3TCH7 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cul4aQ3TCH7 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Cul4aQ3TCH7 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.79
Cul4aQ3TCH7 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.02■□□□□ 0.79
Cul4aQ3TCH7 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cul4aQ3TCH7 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cul4aQ3TCH7 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cul4aQ3TCH7 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cul4aQ3TCH7 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cul4aQ3TCH7 Gm12251-201ENSMUST00000117893 792 ntBASIC20.01■□□□□ 0.79
Cul4aQ3TCH7 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Cul4aQ3TCH7 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cul4aQ3TCH7 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20■□□□□ 0.79
Cul4aQ3TCH7 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cul4aQ3TCH7 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cul4aQ3TCH7 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cul4aQ3TCH7 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cul4aQ3TCH7 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20■□□□□ 0.79
Cul4aQ3TCH7 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20■□□□□ 0.79
Cul4aQ3TCH7 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20■□□□□ 0.79
Cul4aQ3TCH7 Gm9847-201ENSMUST00000052528 599 ntBASIC20■□□□□ 0.79
Cul4aQ3TCH7 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cul4aQ3TCH7 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cul4aQ3TCH7 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cul4aQ3TCH7 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cul4aQ3TCH7 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cul4aQ3TCH7 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Cul4aQ3TCH7 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.99■□□□□ 0.79
Cul4aQ3TCH7 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.99■□□□□ 0.79
Cul4aQ3TCH7 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.99■□□□□ 0.79
Cul4aQ3TCH7 Gm43137-201ENSMUST00000198052 594 ntBASIC19.99■□□□□ 0.79
Cul4aQ3TCH7 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cul4aQ3TCH7 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Cul4aQ3TCH7 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cul4aQ3TCH7 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Cul4aQ3TCH7 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cul4aQ3TCH7 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cul4aQ3TCH7 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cul4aQ3TCH7 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cul4aQ3TCH7 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cul4aQ3TCH7 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cul4aQ3TCH7 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cul4aQ3TCH7 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
Cul4aQ3TCH7 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cul4aQ3TCH7 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cul4aQ3TCH7 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cul4aQ3TCH7 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cul4aQ3TCH7 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cul4aQ3TCH7 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cul4aQ3TCH7 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.97■□□□□ 0.79
Cul4aQ3TCH7 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.97■□□□□ 0.79
Cul4aQ3TCH7 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cul4aQ3TCH7 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cul4aQ3TCH7 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Cul4aQ3TCH7 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cul4aQ3TCH7 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.97■□□□□ 0.79
Cul4aQ3TCH7 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.97■□□□□ 0.79
Cul4aQ3TCH7 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.97■□□□□ 0.79
Cul4aQ3TCH7 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cul4aQ3TCH7 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cul4aQ3TCH7 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cul4aQ3TCH7 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cul4aQ3TCH7 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cul4aQ3TCH7 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cul4aQ3TCH7 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Cul4aQ3TCH7 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cul4aQ3TCH7 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.97■□□□□ 0.79
Cul4aQ3TCH7 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.97■□□□□ 0.79
Cul4aQ3TCH7 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Cul4aQ3TCH7 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
Cul4aQ3TCH7 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cul4aQ3TCH7 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Cul4aQ3TCH7 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Cul4aQ3TCH7 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.96■□□□□ 0.79
Cul4aQ3TCH7 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.96■□□□□ 0.79
Cul4aQ3TCH7 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cul4aQ3TCH7 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cul4aQ3TCH7 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Cul4aQ3TCH7 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cul4aQ3TCH7 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cul4aQ3TCH7 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.96■□□□□ 0.79
Cul4aQ3TCH7 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Cul4aQ3TCH7 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cul4aQ3TCH7 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cul4aQ3TCH7 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cul4aQ3TCH7 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cul4aQ3TCH7 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.95■□□□□ 0.78
Cul4aQ3TCH7 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.95■□□□□ 0.78
Cul4aQ3TCH7 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
Cul4aQ3TCH7 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Cul4aQ3TCH7 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cul4aQ3TCH7 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Cul4aQ3TCH7 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.95■□□□□ 0.78
Cul4aQ3TCH7 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 9.5 ms